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Putative Neisseria meningitidis M04-240196 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press
REBASE ref # 12558
Complete sequence: 2,250,449 bp
GenBank #: CP002423
REBASE acronym: Nme0196
Org_num: 5404
All begin NMBM04240196_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1334 | ATP-dependent Clp protease ATP-binding subunit | |||
1335 | R | Nme18727ORFLP (100% identity) | Nme0196ORF1337P | |
??? | S | S.NmeA710ORF931P (100% identity) | S.Nme0196ORF1337P | |
1337 | M | M.Nme355ORF821P (100% identity) | M.Nme0196ORF1337P | |
1338 | ADP-glyceromanno-heptose 6-epimerase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
72 | hypothetical protein | |||
73 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme0196ORF73P |
74 | S1 RNA binding domain protein | |||
624 | transposase | |||
625 | M | M.NmeA710ORF1828P (81% identity) | GCGCGC | M.Nme0196ORF625P |
626 | R | 340 aa conserved hypothetical protein | GCGCGC | Nme0196ORF625P |
627 | alanyl-tRNA synthetase | |||
910 | ribonucleoside-diphosphate reductase, alpha | |||
911 | M | modification methylase EcoRII | CCWGG | M.Nme0196ORF911P |
912 | R | type II restriction enzyme | CCWGG | Nme0196ORF911P |
913 | ribonucleoside-diphosphate reductase, beta | |||
1126 | 3-isopropylmalate dehydratase, small subunit | |||
1127 | M | M.NmeH44ORF1488P (100% identity) | GGNNCC | M.Nme0196ORF1127P |
1128 | R | pseudogene | GGNNCC | Nme0196ORF1127P |
1129 | 3-isopropylmalate dehydrogenase | |||
1338 | ADP-glyceromanno-heptose 6-epimerase | |||
??? | R | Nme385ORF1306P (100% identity) | CCAGA | Nme0196ORF1340P |
1340 | M | M.NmeMC58III (100% identity) | CCAGA | M.Nme0196ORF1340P |
1341 | hldE bifunctional protein, domain I | |||
1437 | phenylalanyl-tRNA synthetase, beta subunit | |||
1438 | M | M2.NmeMC58II (100% identity) | GACGC | M1.Nme0196ORF1438P |
1439 | R | NmeMC58IIP (100% identity) | GACGC | Nme0196ORF1438P |
1440 | M | M1.NmeMC58IIP (100% identity) | GACGC | M2.Nme0196ORF1438P |
1441 | phenylalanyl-tRNA synthetase, alpha subunit | |||
1830 | conserved domain protein | |||
1831 | R | NmeBS847ORFAP (100% identity) | GATC | Nme0196ORF1831P |
1832 | leucyl-tRNA synthetase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
829 | L-lactate dehydrogenase | |||
830 | R | Nme522ORF870P (100% identity) | Nme0196ORF831P | |
831 | M | M.Nme20492ORFAP (80% identity) | M.Nme0196ORF831P | |
832 | tRNA pseudouridine synthase B | |||
939 | pseudogene | |||
940 | R | NmeMC58ORF1261P (100% identity) | Nme0196ORF940P | |
941 | transposase IS4 family |