Neisseria meningitidis M01-240355 |
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Putative Neisseria meningitidis M01-240355 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press
REBASE ref # 12558
Complete sequence: 2,287,777 bp
GenBank #: CP002422
REBASE acronym: Nme355
Org_num: 6797
All begin NMBM01240355_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 820 | ADP-glyceromanno-heptose 6-epimerase | |||
| 821 | M | M.Nme18727ORFLP (100% identity) | M.Nme355ORF821P | |
| ??? | S | S.NmeA710ORF931P (100% identity) | S.Nme355ORF821P | |
| 823 | R | Nme13ORF1387P (100% identity) | Nme355ORF821P | |
| 824 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1140 | uracil-DNA glycosylase | |||
| ??? | M | M.Nme13280ORF2158P (100% identity) | M.Nme355ORF1141P | |
| 1142 | 137 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 77 | S1 RNA binding domain protein | |||
| 78 | M | M1.NmeM395ORFJP (100% identity) | GGTGA | M1.Nme355ORF78P |
| 79 | M | M.NmeST254ORF61P (100% identity) | GGTGA | M2.Nme355ORF78P |
| 80 | UDP-glucose 4-epimerase GalE | |||
| 77 | S1 RNA binding domain protein | |||
| ??? | M | M.NmeS4ORFJP (100% identity) | GGTGA | M.Nme355ORFAP |
| 80 | UDP-glucose 4-epimerase GalE | |||
| 294 | IS1106 transposase | |||
| 295 | M | M.Nme3683ORF1405P (100% identity) | CCTTC | M.Nme355ORF295P |
| 296 | R | NmeW135ORF222P (100% identity) | CCTTC | Nme355ORF295P |
| 297 | IS1106 transposase | |||
| 817 | hldE bifunctional protein, domain I | |||
| 818 | M | M.NmeW135ORF855P (100% identity) | CCAGA | M.Nme355ORF818P |
| 819 | R | Nme9714ORF1079P (100% identity) | CCAGA | Nme355ORF818P |
| 820 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1527 | alanyl-tRNA synthetase | |||
| 1528 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme355ORF1529P |
| 1529 | M | M.NmeM395II (81% identity) | GCGCGC | M.Nme355ORF1529P |
| 1530 | 76 aa hypothetical protein | |||
| 1822 | 159 aa hypothetical protein | |||
| 1823 | M | M2.Nme98ORF45P (100% identity) | GATC | M1.Nme355ORF1823P |
| 1824 | M | M1.Nme98ORF45P (100% identity) | GATC | M2.Nme355ORF1823P |
| 1825 | leucyl-tRNA synthetase | |||
| 1939 | ATP-dependent RNA helicase hrpA | |||
| 1940 | V | V.NmeS4ORFFP (100% identity) | V.Nme355ORF1942P | |
| 1941 | R | NmeAIP (100% identity) | CCGG | Nme355ORF1942P |
| 1942 | M | M.Nme8249ORF2194P (94% identity) | CCGG | M.Nme355ORF1942P |
| 1943 | IS1106 transposase | |||
| 2019 | cysteinyl-tRNA synthetase | |||
| 2020 | R | Nme9714IIIP (100% identity) | CCSGG | Nme355ORF2021P |
| 2021 | M | M.Nme9714III (100% identity) | CCSGG | M.Nme355ORF2021P |
| 2022 | 83 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1203 | PP-loop family protein | |||
| 1204 | R | Nme99ORF888P (100% identity) | Nme355ORF1205P | |
| 1205 | pseudogene | |||
| 1309 | tRNA pseudouridine synthase B | |||
| 1310 | M | M.Nme8001ORF2830P (97% identity) | M.Nme355ORF1310P | |
| 1311 | R | Nme9714ORF562P (100% identity) | Nme355ORF1310P | |
| 1312 | L-lactate dehydrogenase | |||