Neisseria meningitidis M01-240149 |
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Putative Neisseria meningitidis M01-240149 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press
REBASE ref # 12558
Complete sequence: 2,223,518 bp
GenBank #: CP002421
REBASE acronym: Nme1
Org_num: 6795
All begin NMBM01240149_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 951 | 137 aa hypothetical protein | |||
| 952 | M | M.NmeMC58ORF1223P (82% identity) | M.Nme1ORF952P | |
| 953 | uracil-DNA glycosylase | |||
| 1260 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1261 | R | NmeA710ORF931P (100% identity) | Nme1ORF1263P | |
| 1262 | S | S.Nme533ORF876P (100% identity) | S.Nme1ORF1263P | |
| 1263 | M | M.NmeA710ORF931P (99% identity) | M.Nme1ORF1263P | |
| 1264 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 75 | pseudogene | |||
| 76 | M | restriction endonuclease HphIB | GGTGA | M.Nme1ORF75P |
| 77 | UDP-glucose 4-epimerase | |||
| 174 | IS1106 transposase | |||
| ??? | C | C.NmeW135ORF2552P (100% identity) | C.Nme1ORF176P | |
| 175 | R | NmeSI (100% identity) | AGTACT | Nme1ORF176P |
| 176 | M | M.NmeSI (97% identity) | AGTACT | M.Nme1ORF176P |
| 177 | ATP-dependent RNA helicase hrpA | |||
| 295 | leucyl-tRNA synthetase | |||
| 296 | R | NmeBS847ORFAP (100% identity) | GATC | Nme1ORF296P |
| 297 | conserved domain protein | |||
| 577 | 76 aa hypothetical protein | |||
| 578 | M | DNA-cytosine methyltransferase | GCGCGC | M.Nme1ORF578P |
| 579 | R | 340 aa conserved hypothetical protein | GCGCGC | Nme1ORF578P |
| 580 | alanyl-tRNA synthetase | |||
| 860 | ribonucleoside-diphosphate reductase, alpha | |||
| 861 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme1ORF861P |
| 862 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme1ORF861P |
| 863 | ribonucleoside-diphosphate reductase, beta | |||
| 897 | 3-isopropylmalate dehydrogenase | |||
| 898 | R | NmeMC58ORF1033P (100% identity) | GGNNCC | Nme1ORF899P |
| 899 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme1ORF899P |
| 900 | 3-isopropylmalate dehydratase, small subunit | |||
| 1264 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1265 | R | NmeS4ORFEP (98% identity) | Nme1ORF1266P | |
| 1266 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme1ORF1266P |
| 1267 | hldE bifunctional protein, domain I | |||
| 1362 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 1363 | M | M2.NmeMC58II (100% identity) | GACGC | M1.Nme1ORF1363P |
| 1364 | R | NmeMC58IIP (100% identity) | GACGC | Nme1ORF1363P |
| 1365 | M | M1.NmeMC58IIP (99% identity) | GACGC | M2.Nme1ORF1363P |
| 1366 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 778 | L-lactate dehydrogenase | |||
| 779 | R | Nme8669ORF1399P (100% identity) | Nme1ORF780P | |
| 780 | M | M.Nme563ORF5665P (95% identity) | M.Nme1ORF780P | |
| 781 | tRNA pseudouridine synthase B | |||
| 886 | peptidylprolyl isomerase A | |||
| 887 | M | M.Nme533ORF1254P (97% identity) | M.Nme1ORF887P | |
| 888 | R | Nme8669ORF1516P (100% identity) | Nme1ORF887P | |
| 889 | PP-loop family protein | |||
| 1212 | penicillin-binding protein 6 precursor | |||
| 1213 | R | Nme8669ORF890P (100% identity) | Nme1ORF1214P | |
| 1214 | M | M.Nme8669ORF890P (100% identity) | M.Nme1ORF1214P | |
| 1215 | ribosomal protein L25, Ctc-form | |||