Lactobacillus acidophilus 30SC |
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Putative Lactobacillus acidophilus 30SC RM systems
Ref: Roh,H. et al. unpublished
REBASE ref # 12572
| Sequence length: | GenBank #: | |
| Chromosome: | 2,078,001 bp | CP002559 (NC_015214) |
| plasmid pRKC30SC2: | 12,568 bp | CP002561 (NC_015218) |
REBASE acronym: Lac30
Org_num: 6784
All begin LAC30SC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7865 | Mrr restiction system protein | |||
| 7870 | R | LamPMRA3ORF3395P (43% identity) | Lac30ORF7870P | |
| 7875 | transposase | |||
| 8400 | transposase | |||
| 8405 | S | S.LjoDC222ORF5170P (46% identity) | S.Lac30ORF8410P | |
| 8410 | M | M.Lam20531ORF2650P (98% identity) | M.Lac30ORF8410P | |
| 8415 | R | Lam401ORF8185P (97% identity) | Lac30ORF8410P | |
| 8420 | phosphoribosylamine-glycine ligase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 115 | CysE/LacA/LpxA/NodL family acetyltransferase | |||
| 120 | R | LamS1ORFEP (99% identity) | Lac30ORF120P | |
| 125 | cytosol non-specific dipeptidase | |||
| 1320 | lysyl-tRNA synthetase | |||
| 1325 | M | M.LpaEG9ORF4220P (54% identity) | GAATTC | M.Lac30ORF1325P |
| 1330 | R | Ssp220ORF2000P (67% identity) | Lac30ORF1325P | |
| 1335 | 125 aa hypothetical protein | |||
| 1630 | 190 aa hypothetical protein | |||
| 1635 | RM | Lhe22155ORF1820P (77% identity) | Lac30ORF1635P | |
| 1640 | 123 aa hypothetical protein | |||
| 5185 | restriction endonuclease | |||
| 5190 | RM | Lam6090ORFAP (86% identity) | Lac30ORF5190P | |
| 5195 | 324 aa hypothetical protein | |||
| 5195 | 324 aa hypothetical protein | |||
| 5200 | M | M.LkeM1ORF1865P (90% identity) | M.Lac30ORF5191P | |
| 5205 | ATP-dependent helicase DinG | |||
| plasmid pRKC30SC2 | ||||
| 10920 | 158 aa hypothetical protein | |||
| 10925 | R | LreL11ORF5830P (57% identity) | GGCC | Lac30ORF10930P |
| 10930 | M | M.EfaS1ORF10485P (59% identity) | GGCC | M.Lac30ORF10930P |
| 10935 | V | V.LjoKD1ORF9185P (61% identity) | V.Lac30ORF10930P | |
| 10940 | 69 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 245 | glutamate/gamma-aminobutyrate antiporter | |||
| 250 | R | LamGRLORF325P (99% identity) | Lac30ORF250P | |
| 255 | penicillin-binding protein | |||
| 2275 | mutator protein | |||
| 2280 | R | LamS1ORFCP (99% identity) | Lac30ORF2280P | |
| 2290 | glycosyltransferase | |||
| 5165 | prolyl aminopeptidase | |||
| 5185 | R | Lam6090MrrP (89% identity) | Lac30MrrP | |
| 5190 | type IV restriction endonuclease | |||
| 7860 | 135 aa hypothetical protein | |||
| 7865 | R | LamS1MrrP (97% identity) | Lac30Mrr2P | |
| 7870 | type I restriction enzyme EcoKI subunit R | |||