Lactobacillus delbrueckii subsp. bulgaricus 2038 |
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Putative Lactobacillus delbrueckii subsp. bulgaricus 2038 RM systems
Ref: Zheng,H.-J. et al. Trends Cell Mol Biol 3, 15-30 (2008)
REBASE ref # 12512
Complete sequence: 1,872,918 bp
GenBank #: CP000156
REBASE acronym: Lde2038
Org_num: 6772
All begin LBU_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 894 | Oxidoreductase | |||
| 895 | R | LdeL99ORF930P (100% identity) | Lde2038ORF895P | |
| 896 | 163 aa Hypothetical conserved protein | |||
| 1044 | 110 aa Hypothetical protein | |||
| 1045 | R | LdeND04ORF1688P (57% identity) | R1.Lde2038ORF1048P | |
| 1046 | R | HsdR | R2.Lde2038ORF1048P | |
| ??? | S | S3.LdeP3MRAORF5415P (54% identity) | S1.Lde2038ORF1048P | |
| ??? | S | S3.LdeP3MRAORF5415P (47% identity) | S2.Lde2038ORF1048P | |
| 1047 | Integrase/recombinase, phage integrase family | |||
| ??? | S | S3.LdeP3MRAORF5415P (53% identity) | S3.Lde2038ORF1048P | |
| ??? | S | S1.LdeP3MRAORF5415P (100% identity) | S4.Lde2038ORF1048P | |
| ??? | M | M.LdeP3MRAORF5415P (99% identity) | M.Lde2038ORF1048P | |
| 1049 | HsdM-type I modification subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 993 | Phosphinothricin acetyltransferase | |||
| 994 | M | M.Lde871ORF7160P (99% identity) | M.Lde2038ORF994P | |
| 995 | RM | Lde871ORF7160P (89% identity) | Lde2038ORF994P | |
| 996 | 75 aa Hypothetical conserved protein | |||
| 1697 | NADH nitroreductase | |||
| 1698 | M | M.Lde1ORF135P (97% identity) | GCSGC | M.Lde2038ORF1698P |
| 1699 | R | LdeBBORF1142P (99% identity) | GCSGC | Lde2038ORF1698P |
| 1700 | H | H.LdeBBORF1142P (99% identity) | H.Lde2038ORF1698P | |
| ??? | HpaII short patch repair endonuclease | |||
| 1700 | 616 aa Hypothetical conserved protein | |||
| ??? | V | V.LdeBBORF1147P (100% identity) | V.Lde2038ORFAP | |
| 1701 | 261 aa Hypothetical conserved protein | |||
| ??? | HpaII short patch repair endonuclease | |||
| 1701 | R | LdeBBORF1147P (94% identity) | Lde2038ORF1701P | |
| 1702 | Aminopeptidase N | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24 | 185 aa Hypothetical conserved protein | |||
| 25 | R | LdeR03ORF145P (100% identity) | Lde2038ORF25P | |
| 26 | 231 aa Hypothetical conserved protein | |||
| 391 | RNA methyltransferase | |||
| 392 | R | LdeR03MrrP (100% identity) | Lde2038MrrP | |
| 393 | 211 aa Hypothetical conserved protein | |||
| 1513 | 102 aa Hypothetical protein | |||
| 1514 | R | LdeP3MRAORF7925P (100% identity) | Lde2038ORF1514P | |
| 1515 | UDP-glucose 4-epimerase | |||