Escherichia coli KO11 |
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Putative Escherichia coli KO11 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12534
| Sequence length: | GenBank #: | |
| Chromosome: | 4,920,168 bp | CP002516 |
| plasmid pEKO1101: | 103,795 bp | CP002517 |
REBASE acronym: EcoKO11
Org_num: 6757
All begin EKO11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4011 | 128 aa hypothetical protein | |||
| 4012 | M | M.EcohubtORF19935P (100% identity) | M.EcoKO11ORF4012P | |
| 4013 | S | S.SflN101ORF11895P (100% identity) | S.EcoKO11ORF4012P | |
| 4014 | 428 aa hypothetical protein | |||
| 4035 | pseudogene | |||
| 4036 | R | EcohubtORF20055P (100% identity) | EcoKO11ORF4037P | |
| 4037 | M | M.EcohubtORF20055P (100% identity) | M.EcoKO11ORF4037P | |
| 4038 | S | S.EcohubtORF20055P (98% identity) | S.EcoKO11ORF4037P | |
| 4039 | 582 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 357 | Sporulation domain-containing protein | |||
| 358 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoKO11DamP |
| 359 | ribulose-phosphate 3-epimerase | |||
| 462 | 59 aa hypothetical protein | |||
| 463 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoKO11ORF463P |
| 464 | transcriptional regulator, Fis family | |||
| 1385 | NinB family protein | |||
| 1386 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoKO11ORF1386P |
| 1387 | NINE family protein | |||
| 1813 | metal dependent phosphohydrolase | |||
| 1814 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoKO11DcmP |
| 1815 | V | V.SsoSE61DcmP (100% identity) | V.EcoKO11DcmP | |
| 1816 | carboxylate/amino acid/amine transporter | |||
| 2213 | protein of unknown function DUF977 | |||
| 2214 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoKO11ORF2214P | |
| 2215 | pseudogene | |||
| 3027 | replication protein A | |||
| 3028 | M | M.EcohubtORF7795P (100% identity) | GATC | M.EcoKO11ORF3028P |
| 3029 | transcriptional regulator, TraR/DksA family | |||
| 4430 | 341 aa hypothetical protein | |||
| 4431 | M | M.EcosE2ORF21575P (100% identity) | GGCC | M.EcoKO11ORF4431P |
| 4432 | protein of unknown function DUF437 | |||
| plasmid pEKO1101 | ||||
| 4667 | 41 aa hypothetical protein | |||
| 4668 | M | M.Sfl60ORF25670P (100% identity) | M.EcoKO11ORF4668P | |
| 4669 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4008 | restriction endonuclease | |||
| 4009 | R | SflN101McrBP (100% identity) | EcoKO11McrBP | |
| 4010 | R | EcohubtMcrCP (100% identity) | EcoKO11McrCP | |
| 4011 | 128 aa hypothetical protein | |||