Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 RM systems
Ref: Richardson,E.J. et al. J. Bacteriol. 193 (12), 3162-3163 (2011)
REBASE ref # 12813
| Sequence length: | GenBank #: | |
| Chromosome: | 4,878,013 bp | CP002487 |
| plasmid TY474p1: | 93,842 bp | CP002488 |
| plasmid TY474p2: | 86,908 bp | CP002489 |
REBASE acronym: Sen474
Org_num: 6754
All begin STM474_, STM474_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4727 | endoribonuclease SymE | |||
| 4728 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen474ORF4729P |
| 4729 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen474ORF4729P |
| 4730 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen474ORF4729P |
| 4731 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2021 | Uncharacterized inner membrane transporter yedA | |||
| 2022 | V | V.StyUK1DcmP (100% identity) | V.Sen474DcmP | |
| 2023 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen474DcmP |
| 2024 | Uncharacterized protein yedJ | |||
| 2066 | phage protein | |||
| 2068 | M | M.StyUK1V (100% identity) | GATC | M.Sen474ORF2068P |
| 2069 | replication protein | |||
| 2735 | Eaa-like protein | |||
| 2736 | M | M.Sens29958ORF6205P (100% identity) | M.Sen474ORF2736P | |
| 2737 | Ead-like protein | |||
| 2854 | replication endonuclease from | |||
| 2855 | M | M.StySopEDamP (100% identity) | GATC | M.Sen474ORF2855P |
| 2856 | 75 aa hypothetical protein | |||
| 3547 | DNA-binding protein Fis | |||
| 3548 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen474ORF3548P |
| 3549 | periplasmic protein | |||
| 3650 | ribulose-phosphate 3-epimerase | |||
| 3651 | M | M.StyTDamP (100% identity) | GATC | M.Sen474DamP |
| 3652 | DamX protein | |||
| 4692 | ABC-type sugar/spermidine/putrescine | |||
| 4693 | RM | SenSTm9ORF21385P (100% identity) | GATCAG | Sen474ORF4693P |
| 4694 | DNA repair ATPase | |||
| plasmid TY474p1 | ||||
| 1049 | cytoplasmic protein | |||
| 1050 | M | M.StyUK1ORFAP (100% identity) | M.Sen474ORF1050P | |
| 1051 | cytoplasmic protein | |||
| plasmid TY474p2 | ||||
| 220 | 308 aa hypothetical protein | |||
| 221 | M | M.SspPIBORF23080P (100% identity) | M.Sen474ORF221P | |
| 222 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 370 | inner membrane protein | |||
| 371 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen474ORF371P |
| 372 | R | StyUK1IP (100% identity) | CAGAG | Sen474ORF371P |
| 373 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4730 | type III restriction enzyme | |||
| 4731 | R | StyUK1MrrP (100% identity) | Sen474MrrP | |
| 4732 | 95 aa hypothetical protein | |||