Bacteroides xylanisolvens XB1A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides xylanisolvens XB1A RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12435
Complete sequence: 5,976,145 bp
GenBank #: FP929033
REBASE acronym: Bxy
Org_num: 6694
All begin BXY_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 36310 | Helix-turn-helix. | |||
| 36320 | R | PmeBin7ORFBP (100% identity) | BxyORF36350P | |
| ??? | M | M.Bxy514ORF13810P (81% identity) | M.BxyORF36350P | |
| ??? | S | S3.Fnu048ORFCP (40% identity) | S1.BxyORF36350P | |
| 36390 | S | S2.Bsa288ORF9920P (51% identity) | S2.BxyORF36350P | |
| 36400 | Site-specific recombinase XerD | |||
| 36480 | 186 aa hypothetical protein | |||
| 36500 | C | C.Pvu1099ORF10410P (100% identity) | C.BxyORF36520P | |
| 36510 | R | Pdo1051IIIP (99% identity) | BxyORF36520P | |
| 36520 | M | M.Pdi150ORF11280P (99% identity) | M.BxyORF36520P | |
| 36530 | Virulence protein | |||
| 36540 | 136 aa hypothetical protein | |||
| 36550 | S | S.Pdi615ORF2620P (59% identity) | S.BxyORF36520P | |
| 36570 | 293 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5870 | 74 aa hypothetical protein | |||
| ??? | RM | PmeBin411ORFAP (50% identity) | BxyORF5880P | |
| ??? | Type III restriction enzyme, res subunit./T5orf172 domain. | |||
| ??? | type III restriction system endonuclease | |||
| ??? | RM | Dmc2ORF2515P (19% identity) | BxyORF5890P | |
| 5900 | Eco57I restriction endonuclease. | |||
| ??? | Type III restriction enzyme, res subunit./T5orf172 domain. | |||
| 5900 | RM | M2.Spe19205IV (48% identity) | BxyORF5900P | |
| ??? | type III restriction system methylase | |||
| 5900 | Eco57I restriction endonuclease. | |||
| ??? | RM | M1.Dmc2ORF2515P (40% identity) | BxyORF5910P | |
| 5920 | Site-specific recombinase XerD | |||
| 13900 | 730 aa hypothetical protein | |||
| 13910 | RM | PmeBin96ORFBP (97% identity) | BxyORF13910P | |
| 13920 | 250 aa hypothetical protein | |||
| 23150 | Rubrerythrin | |||
| 23160 | M | M2.PmeBin7ORFAP (86% identity) | GATC | M1.BxyORF23160P |
| 23170 | R | PmeBin7ORFAP (100% identity) | GATC | BxyORF23160P |
| 23180 | M | M1.PmeBin7ORFAP (100% identity) | GATC | M2.BxyORF23160P |
| 23190 | Signal transduction histidine kinase | |||
| 24320 | 221 aa hypothetical protein | |||
| ??? | M | M.Pgo241ORF1645P (93% identity) | GATC | M.BxyORF24330P |
| 24360 | Type IV secretory pathway, VirD4 components | |||
| 25270 | Prophage antirepressor | |||
| 25280 | M | M.PmeBin431ORFDP (88% identity) | YGGCCR | M.BxyORF25280P |
| 25290 | 124 aa hypothetical protein | |||
| 27070 | 510 aa hypothetical protein | |||
| 27080 | C | C.Pdo17855ORF19035P (58% identity) | C.BxyORF27090P | |
| ??? | M | M.Pme1567ORF11690P (74% identity) | CTAG | M.BxyORF27090P |
| 27110 | 257 aa hypothetical protein | |||
| 27120 | R | Pme1567ORF11690P (53% identity) | CTAG | BxyORF27090P |
| 27130 | 48 aa hypothetical protein | |||
| 41140 | 125 aa hypothetical protein | |||
| 41150 | M | M.Bsa9166ORF16220P (100% identity) | GACNNNGTC | M.BxyORF41150P |
| 41160 | R | Bsa9166ORF16220P (100% identity) | GACNNNGTC | BxyORF41150P |
| 41170 | Helix-turn-helix. | |||
| 41160 | 299 aa hypothetical protein | |||
| 41170 | C | C.Bsa9166ORF16220P (100% identity) | C.BxyORF41170P | |
| 41200 | 36 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24840 | 143 aa hypothetical protein | |||
| 24850 | R | Bfi10MrrP (73% identity) | BxyMrrP | |
| 24860 | 453 aa hypothetical protein | |||