Bifidobacterium longum subsp. longum JCM 1217 |
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Putative Bifidobacterium longum subsp. longum JCM 1217 RM systems
Ref: Fukuda,S. et al. Nature 469, 543-547 (2011)
REBASE ref # 12458
Complete sequence: 2,385,164 bp
GenBank #: AP010888 (NC_015067)
REBASE acronym: Blo1217
Org_num: 6685
All begin BLLJ_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1479 | phage integrase | |||
| 1480 | S | S2.Blo18ORFBP (100% identity) | S1.Blo1217ORF1481P | |
| ??? | S | S1.BloBPORF2330P (100% identity) | S2.Blo1217ORF1481P | |
| 1481 | M | M.BloZJ1ORFCP (100% identity) | M.Blo1217ORF1481P | |
| 1482 | R | BloZJ1ORFCP (100% identity) | Blo1217ORF1481P | |
| 1483 | isoleucyl-tRNA synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 877 | 115 aa hypothetical protein | |||
| 878 | M | M.Blo18ORFDP (99% identity) | AAGCTT | M.Blo1217ORF878P |
| 879 | 63 aa hypothetical protein | |||
| 891 | 100 aa hypothetical protein | |||
| 892 | RM | BloBPORF5145P (100% identity) | GAGGAC | Blo1217ORF892P |
| 893 | 156 aa hypothetical protein | |||
| 990 | 70 aa hypothetical protein | |||
| ??? | S | S.Blo3128ORF9440P (100% identity) | S.Blo1217ORF992P | |
| 992 | RM | BloBPORF4545P (100% identity) | Blo1217ORF992P | |
| 993 | 76 aa hypothetical protein | |||
| 1006 | 47 aa hypothetical protein | |||
| 1007 | M | M.BloBPORF4480P (100% identity) | M.Blo1217ORF1004P | |
| 1008 | 138 aa hypothetical protein | |||
| 1010 | 173 aa hypothetical protein | |||
| 1011 | M | M.BloBPORF4460P (100% identity) | AAGCTT | M.Blo1217ORF1011P |
| 1012 | 95 aa hypothetical protein | |||
| 1037 | 221 aa hypothetical protein | |||
| 1038 | M | M.BloBPORF4370P (100% identity) | GAATTC | M.Blo1217ORF1038P |
| 1039 | endonuclease | |||
| 1038 | 320 aa conserved hypothetical protein | |||
| 1039 | R | BloBPORF4360P (100% identity) | Blo1217ORF1040P | |
| 1040 | M | M2.BloBB46ORF5425P (100% identity) | M.Blo1217ORF1040P | |
| 1041 | 126 aa hypothetical protein | |||