Ruminococcus torques L2-14 |
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Putative Ruminococcus torques L2-14 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 3,341,681 bp
GenBank #: FP929055
REBASE acronym: RtoL2
Org_num: 6658
All begin RTO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 30830 | 150 aa hypothetical protein | |||
| 30860 | C | C.Rin31NBORF17250P (100% identity) | C.RtoL2ORF30870P | |
| 30870 | M | M.Bpes43243ORF11690P (99% identity) | M.RtoL2ORF30870P | |
| 30880 | S | S1.Rin31NBORF17250P (88% identity) | S1.RtoL2ORF30870P | |
| 30890 | Site-specific recombinase XerD | |||
| 30900 | S | S3.Efa281ORF4040P (44% identity) | S2.RtoL2ORF30870P | |
| ??? | S | S.OspMM59ORF1140P (47% identity) | S3.RtoL2ORF30870P | |
| 30920 | 276 aa hypothetical protein | |||
| 30930 | R | Efa281ORF4040P (99% identity) | RtoL2ORF30870P | |
| 30940 | Restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14840 | translation elongation factor 1A (EF-1A/EF-Tu) | |||
| 14850 | V | V.PmeBin160ORFBP (100% identity) | V.RtoL2ORF14860P | |
| 14860 | M | M.PmeBin160ORFBP (100% identity) | GGNCC | M.RtoL2ORF14860P |
| 14870 | R | PmeBin160ORFBP (100% identity) | GGNCC | RtoL2ORF14860P |
| 14880 | 305 aa hypothetical protein | |||
| 21060 | 634 aa hypothetical protein | |||
| 21070 | M | M.PmeBin60ORFAP (100% identity) | CCSSGG | M.RtoL2ORF21070P |
| 21100 | 289 aa hypothetical protein | |||
| 32060 | 98 aa hypothetical protein | |||
| 32070 | C | C.PmeBin160ORFCP (100% identity) | C.RtoL2ORF32080P | |
| 32080 | M | M.PmeBin160ORFCP (95% identity) | M.RtoL2ORF32080P | |
| 32090 | R | PmeBin160ORFCP (100% identity) | RtoL2ORF32080P | |
| 32100 | Uncharacterized conserved protein | |||
| 32110 | Restriction endonuclease | |||
| ??? | V | V.PmeBin160ORFCP (100% identity) | V.RtoL2ORF32080P | |
| 32140 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 31430 | 251 aa hypothetical protein | |||
| 31440 | M | M.OspMM50ORF17200P (83% identity) | M.RtoL2ORF31440P | |
| 31450 | R | PmeBin117ORFHP (98% identity) | RtoL2ORF31440P | |
| 31460 | 323 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30930 | type I site-specific deoxyribonuclease, HsdR | |||
| 30940 | R | PmeBin169MrrP (100% identity) | RtoL2Mrr2P | |
| 30950 | Nucleotidyltransferase/DNA polymerase involved | |||
| 32090 | 719 aa hypothetical protein | |||
| 32100 | R | Bpr316McrB2P (45% identity) | RtoL2McrBP | |
| 32110 | Restriction endonuclease | |||
| 32100 | Uncharacterized conserved protein | |||
| 32110 | R | Gap78ORF1815P (17% identity) | RtoL2McrAP | |
| ??? | short patch repair protein | |||