Ruminococcus species SR1/5 |
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Putative Ruminococcus species SR1/5 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 3,545,606 bp
GenBank #: FP929053
REBASE acronym: RspSR1
Org_num: 6655
All begin CK1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5190 | Uncharacterized conserved protein | |||
| ??? | M | M.Bsp81119ORF1195P (92% identity) | M.RspSR1ORF5200P | |
| ??? | S | S1.AhaGIF7ORF5830P (51% identity) | S.RspSR1ORF5200AP | |
| 5240 | Site-specific recombinase XerD | |||
| 5250 | S | S1.EreFMUORF4225P (43% identity) | S.RspSR1ORF5200BP | |
| 5260 | 76 aa hypothetical protein | |||
| ??? | R | PmeBin32ORFDP (96% identity) | RspSR1ORF5200P | |
| 5300 | Mg2+ transporter (mgtE) | |||
| 14890 | Predicted transcriptional regulator | |||
| 14900 | M | M.Rin31NBORF2860P (93% identity) | M.RspSR1ORF14900P | |
| 14910 | 120 aa hypothetical protein | |||
| 29730 | 264 aa hypothetical protein | |||
| 29740 | S | S.Bsp81119ORF9725P (99% identity) | S.RspSR1ORF29750P | |
| 29750 | M | M.Bsp81119ORF9725P (99% identity) | M.RspSR1ORF29750P | |
| ??? | R | Bsp81119ORF9725P (98% identity) | RspSR1ORF29750P | |
| 29780 | C | C.Bsp81119ORF9725P (100% identity) | C.RspSR1ORF29750P | |
| 29790 | 33 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | 477 aa hypothetical protein | |||
| ??? | M | M.RspMGS15ORFLP (99% identity) | GATC | M.RspSR1ORF3280P |
| 3290 | Topoisomerase IA | |||
| 14130 | 78 aa hypothetical protein | |||
| 14140 | M | M.Bsp81119ORF14435P (93% identity) | CTSAG | M.RspSR1ORF14140P |
| 14150 | 69 aa hypothetical protein | |||
| 14370 | 214 aa hypothetical protein | |||
| 14380 | M | M.Bsp81119ORF15095P (99% identity) | M.RspSR1ORF14380P | |
| 14390 | 192 aa hypothetical protein | |||
| 16430 | 157 aa hypothetical protein | |||
| ??? | RM | CcoMI (99% identity) | CAGCAG | RspSR1ORF16440P |
| 16470 | 55 aa hypothetical protein | |||
| 30170 | 46 aa hypothetical protein | |||
| 30190 | RM | Bsp81119ORF9630P (100% identity) | RspSR1ORF30190P | |
| 30200 | Site-specific recombinases, DNA invertase Pin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 950 | 111 aa hypothetical protein | |||
| 970 | R | McrBC 5-methylcytosine restriction system | RspSR1McrCP | |
| 980 | 108 aa hypothetical protein | |||