Ruminococcus bromii L2-63 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ruminococcus bromii L2-63 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12145
Complete sequence: 2,249,085 bp
GenBank #: FP929051
REBASE acronym: RbrL2
Org_num: 6654
All begin RBR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8940 | Type I restriction modification DNA specificity | |||
| 8950 | R | LplPMO08ORF3910P (66% identity) | RbrL2ORF8970P | |
| 8960 | S | S.PmeBin79ORFGP (45% identity) | S.RbrL2ORF8970P | |
| 8970 | M | M.SeqG6ORF7535P (83% identity) | M.RbrL2ORF8970P | |
| 8980 | Site-specific recombinase XerD | |||
| 8980 | Site-specific recombinase XerD | |||
| 9000 | S | S1.Shy12224ORF643P (70% identity) | S.RbrL2ORF9000P | |
| 9010 | 167 aa hypothetical protein | |||
| 21370 | 69 aa hypothetical protein | |||
| 21380 | M | M.PmeBin326ORFBP (100% identity) | M.RbrL2ORF21380P | |
| 21390 | S | S.PmeBin326ORFBP (98% identity) | S.RbrL2ORF21380P | |
| 21400 | 605 aa hypothetical protein | |||
| 21410 | R | PmeBin326ORFBP (99% identity) | RbrL2ORF21380P | |
| 21420 | 124 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 900 | Site-specific recombinases, DNA invertase Pin | |||
| 920 | M | M.PmiAC2ORF6465P (100% identity) | GATC | M.RbrL2ORF920P |
| 930 | 130 aa hypothetical protein | |||
| 930 | 130 aa hypothetical protein | |||
| 950 | M | M.PmiAC2ORF6480P (100% identity) | CCSSGG | M.RbrL2ORF950P |
| 970 | Phosphoadenosine phosphosulfate reductase | |||
| 9730 | 92 aa hypothetical protein | |||
| ??? | M | M1.Ssp35185ORF701P (52% identity) | M.RbrL2ORF9740P | |
| 9750 | Restriction endonuclease | |||
| 17350 | 71 aa hypothetical protein | |||
| ??? | M | M.Cin14501ORF4645P (72% identity) | GATC | M.RbrL2ORF17360P |
| 17380 | Domain of unknown function (DUF3560). | |||
| 21090 | 289 aa hypothetical protein | |||
| 21120 | M | M.Sin30303ORF6845P (100% identity) | CCSSGG | M.RbrL2ORF21120P |
| 21130 | 689 aa hypothetical protein | |||
| 21820 | 65 aa hypothetical protein | |||
| 21830 | M | M2.PmeBin257ORFAP (97% identity) | M.RbrL2ORF21830P | |
| 21840 | Site-specific DNA methylase | |||
| 21830 | Site-specific DNA methylase | |||
| 21840 | M | M1.PmeBin257ORFAP (64% identity) | YGGCCR | M.RbrL2ORF21840P |
| 21850 | Site-specific DNA methylase | |||
| 21840 | Site-specific DNA methylase | |||
| 21850 | M | M1.RspFMBCY1ORF11575P (21% identity) | M.RbrL2ORF21850P | |
| 21870 | 50 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19990 | Protein of unknown function (DUF524)./Domain of | |||
| 20000 | R | 1034 aa hypothetical protein | RbrL2McrBP | |
| 20020 | 226 aa hypothetical protein | |||