Putative Roseburia intestinalis XB6B4 RM systems
Ref: Pajon,A. et al. unpublished
REBASE ref # 12435
Complete sequence: 4,286,292 bp
GenBank #: FP929050
REBASE acronym: Rin6
Org_num: 6657
All begin RO1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
22130 | Predicted transcriptional regulator | |||
22140 | M | Type I restriction-modification system | M.Rin6ORF22140P | |
22150 | 83 aa hypothetical protein | |||
29440 | 42 aa hypothetical protein | |||
29450 | S | S1.EreMORF17650P (96% identity) | S1.Rin6ORF29490P | |
29460 | Site-specific recombinase XerD | |||
29470 | S | S2.EreMORF17650P (100% identity) | S2.Rin6ORF29490P | |
29480 | S | Type I restriction modification DNA specificity | S3.Rin6ORF29490P | |
29490 | M | M.Rho2517ORFKP (48% identity) | M.Rin6ORF29490P | |
??? | R | Rho2517ORFKP (81% identity) | Rin6ORF29490P | |
29510 | 55 aa hypothetical protein | |||
37730 | Plasmid recombination enzyme. | |||
37750 | M | M.EspMGS26ORFHP (97% identity) | M.Rin6ORF37750P | |
37760 | S | S.PmeBin314ORFAP (61% identity) | S.Rin6ORF37750P | |
37770 | R | EbaCHKC4ORF1025P (88% identity) | Rin6ORF37750P | |
37790 | 276 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1710 | 92 aa hypothetical protein | |||
1720 | M | M.Rin31NBORF1735P (100% identity) | M.Rin6ORF1720P | |
23880 | 60 aa hypothetical protein | |||
23890 | M | M.Cce743II (84% identity) | M1.Rin6ORF23890P | |
23900 | M | M.Cce743I (60% identity) | M2.Rin6ORF23890P | |
23910 | Site-specific DNA methylase | |||
24310 | 530 aa hypothetical protein | |||
??? | M | M.PspC3ORF13115P (50% identity) | GTCGAC | M.Rin6ORF24320P |
24340 | Response regulator containing a CheY-like | |||
??? | RM | LbaNSJ4ORF5870P (46% identity) | Rin6ORF28320P | |
28330 | 79 aa hypothetical protein | |||
35790 | 63 aa hypothetical protein | |||
35800 | M | M.PmeBin127ORFDP (67% identity) | GATC | M.Rin6ORF35800P |
35810 | Transcriptional activator, adenine-specific DNA | |||
35800 | Transcriptional activator, adenine-specific DNA | |||
35810 | M | M.PmeBin126ORFEP (66% identity) | GATC | M.Rin6ORF35810P |
35820 | 127 aa hypothetical protein | |||
40550 | 92 aa hypothetical protein | |||
??? | M | M.Rsp831bORF6930P (81% identity) | M.Rin6ORFAP | |
40570 | 135 aa hypothetical protein | |||
42040 | 486 aa hypothetical protein | |||
42050 | M | M.RinL182ORF353P (100% identity) | M.Rin6ORF42050P | |
42080 | 322 aa hypothetical protein | |||
43320 | 204 aa hypothetical protein | |||
??? | M | 159 aa hypothetical protein ROSEINA2194_02326 | M.Rin6ORF43330P | |
43340 | 149 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2670 | Abortive infection bacteriophage resistance | |||
2680 | R | Rho2517MrrP (100% identity) | Rin6MrrP | |
2690 | DNA replication protein | |||
4260 | 604 aa hypothetical protein | |||
4280 | R | RinLORF6814P (74% identity) | Rin6ORF4280P | |
4290 | ADP-ribose pyrophosphatase |