Escherichia coli 2024CK-00184 |
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Putative Escherichia coli 2024CK-00184 RM systems
Ref: Hergert,J. et al. unpublished
REBASE ref # 35260
| Sequence length: | GenBank #: | |
| Chromosome: | 5,280,470 bp | CP149836 |
| plasmid unnamed1: | 194,719 bp | CP149837 |
REBASE acronym: Eco0184
Org_num: 76870
All begin WKV46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18020 | endoribonuclease SymE | |||
| 18025 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco0184ORF18035P |
| 18030 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco0184ORF18035P |
| 18035 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco0184ORF18035P |
| 18040 | restriction endonuclease | |||
| 19840 | 156 aa hypothetical protein | |||
| 19845 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco0184ORF19850P |
| 19850 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco0184ORF19850P |
| 19855 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco0184ORF19850P |
| 19860 | type IV toxin-antitoxin system AbiEi family | |||
| 24245 | 75 aa hypothetical protein | |||
| 24250 | R | EcosEC2ORF13930P (100% identity) | Eco0184ORF24260P | |
| 24255 | S | S.EcosEC2ORF13930P (100% identity) | S.Eco0184ORF24260P | |
| 24260 | M | M.EcosS1ORF17110P (100% identity) | M.Eco0184ORF24260P | |
| 24265 | GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3800 | drug/metabolite exporter YedA | |||
| 3805 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco0184DcmP |
| 3810 | M | M.EcosS9DcmP (99% identity) | CCWGG | M.Eco0184DcmP |
| 3815 | phosphohydrolase | |||
| 11280 | DNA-binding transcriptional regulator Fis | |||
| 11285 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0184ORF11285P |
| 11290 | DUF2556 family protein | |||
| 11880 | ribulose-phosphate 3-epimerase | |||
| 11885 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0184DamP |
| 11890 | cell division protein DamX | |||
| 16325 | conjugal transfer protein TraG N-terminal | |||
| 16330 | M | M.EcosS3ORF15775P (100% identity) | M.Eco0184ORF16330P | |
| 16335 | R | EcosS3ORF15775P (100% identity) | Eco0184ORF16330P | |
| 16340 | response regulator receiver domain | |||
| 17650 | helix-turn-helix domain-containing protein | |||
| 17655 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco0184ORF17655P |
| 17660 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco0184ORF17655P |
| 17665 | R | EcosS9ORF2810P (66% identity) | GGTCTC | Eco0184ORF17655P |
| 17670 | IS3-like element ISEc52 family transposase | |||
| 17680 | IS3 family transposase | |||
| 17685 | R | EcosS9ORF2810P (33% identity) | GGTCTC | Eco0184ORF17685P |
| 17690 | McrC family protein | |||
| 23355 | 71 aa hypothetical protein | |||
| 23360 | M | M.KpnYN1ORFGP (89% identity) | M.Eco0184ORF23360P | |
| 23365 | helix-turn-helix transcriptional regulator | |||
| 25980 | TrmB family transcriptional regulator | |||
| 25985 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco0184ORF25985P |
| 26000 | DUF3927 family protein | |||
| plasmid unnamed1 | ||||
| 27165 | 103 aa hypothetical protein | |||
| 27170 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco0184ORF27170P | |
| 27175 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17685 | 195 aa hypothetical protein | |||
| ??? | R | EcoU15AMcrCP (100% identity) | Eco0184McrCP | |
| 17695 | R | EcosS3McrBP (100% identity) | Eco0184McrBP | |
| 17700 | glycosyltransferase family 2 protein | |||
| 18035 | class I SAM-dependent DNA methyltransferase | |||
| 18040 | R | Ecou021MrrP (100% identity) | Eco0184MrrP | |
| 18045 | BrnT family toxin | |||