Campylobacter coli NPRC(S) 01.13898 |
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Putative Campylobacter coli NPRC(S) 01.13898 RM systems
Ref: Zhang,M. Ji Bing Jian Ce 38 (12), 1439-1445 (2023)
REBASE ref # 38549
Complete sequence: 1,680,467 bp
GenBank #: CP149884
REBASE acronym: Cco8
Org_num: 76779
All begin WGQ50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7480 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7485 | R | Cco1157ORF8430P (100% identity) | CRAANNNNNNNRTAG | Cco8ORF7520P |
| 7490 | 192 aa hypothetical protein | |||
| 7495 | RNA-directed DNA polymerase | |||
| 7500 | DUF6037 family protein | |||
| 7505 | 254 aa hypothetical protein | |||
| 7510 | S | S.Cco1157ORF8430P (100% identity) | CRAANNNNNNNRTAG | S.Cco8ORF7520P |
| 7515 | Fic family protein | |||
| 7520 | M | M.Ccos1875ORFAP (100% identity) | CRAANNNNNNNRTAG | M.Cco8ORF7520P |
| 7525 | alpha/beta hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1200 | carbamoyl-phosphate synthase large subunit | |||
| 1205 | M | M.Ccos32805ORF3875P (100% identity) | GATC | M.Cco8ORF1205P |
| 1210 | PD-(D/E)XK nuclease superfamily protein | |||
| 4865 | sulfur carrier protein ThiS | |||
| 4870 | RM | Cco1157ORF5465P (100% identity) | GGGTDA | Cco8ORF4870P |
| 4875 | succinyl-diaminopimelate desuccinylase | |||
| 4885 | NAD-dependent deacetylase | |||
| 4890 | RM | Cco3115ORF965P (99% identity) | Cco8ORF4890P | |
| 4895 | endonuclease MutS2 | |||
| 7740 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 7745 | M | M.Ccos32805ORF3585P (100% identity) | RAATTY | M.Cco8ORF7745P |
| 7750 | translation initiation factor IF-3 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8115 | metal ABC transporter permease | |||
| 8120 | R | Csp6468McrCP (100% identity) | Cco8McrCP | |
| 8125 | R | Cco1157McrBP (100% identity) | Cco8McrBP | |
| 8130 | 95 aa hypothetical protein | |||