Clostridioides difficile Z1322PCD0039 |
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Putative Clostridioides difficile Z1322PCD0039 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,095,974 bp
GenBank #: CP149688
REBASE acronym: Cdi39
Org_num: 76828
All begin WIR85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12375 | 145 aa hypothetical protein | |||
| 12380 | R | CdiS0942ORF16230P (100% identity) | AYGNNNNNNCTG | Cdi39ORF12405P |
| 12385 | 300 aa hypothetical protein | |||
| 12390 | 97 aa hypothetical protein | |||
| 12395 | 150 aa hypothetical protein | |||
| 12400 | S | S.PdiBJ08ORFAP (100% identity) | AYGNNNNNNCTG | S.Cdi39ORF12405P |
| 12405 | M | M.CdiRSS2ORF3900P (100% identity) | AYGNNNNNNCTG | M.Cdi39ORF12405P |
| 12410 | 115 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10510 | patatin-like phospholipase family protein | |||
| 10515 | M | M.Cdi78I (100% identity) | CAAAAA | M.Cdi39ORF10515P |
| 10520 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6865 | sigma 54-interacting transcriptional regulator | |||
| 6870 | R | Pdi6602McrCP (100% identity) | Cdi39McrCP | |
| 6875 | R | Cdi52McrBP (100% identity) | Cdi39McrBP | |
| 6880 | cell division protein | |||