Clostridioides difficile Z1322HCD0043 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridioides difficile Z1322HCD0043 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 3,970,152 bp
GenBank #: CP149744
REBASE acronym: Cdi43
Org_num: 76801
All begin WIS23_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2705 | DUF6809 family protein | |||
| 2710 | R | CdiST42DptFP (100% identity) | Cdi43DptFP | |
| 2715 | DNA phosphorothioation-dependent restriction | |||
| 2710 | DNA phosphorothioation-dependent restriction | |||
| 2715 | R | CdiST42DptGP (100% identity) | Cdi43DptGP | |
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2715 | DNA phosphorothioation-dependent restriction | |||
| ??? | R | Cdi12DptHP (100% identity) | Cdi43DptHP | |
| 2735 | DndE family protein | |||
| ??? | DNA phosphorothioation-dependent restriction protein DptH | |||
| 2735 | M | M.Pdi9689DndEP (100% identity) | M.Cdi43DndEP | |
| 2740 | AAA family ATPase | |||
| 2735 | DndE family protein | |||
| 2740 | M | M.Pdi9689DndDP (100% identity) | M.Cdi43DndDP | |
| 2745 | DNA phosphorothioation system sulfurtransferase | |||
| 2740 | AAA family ATPase | |||
| 2745 | M | M.Pdi9689DndCP (100% identity) | M.Cdi43DndCP | |
| 2750 | 50 aa hypothetical protein | |||
| 4525 | Rrf2 family transcriptional regulator | |||
| 4530 | M | M.CdiRSS3ORF14215P (100% identity) | CAAAAA | M.Cdi43ORF4530P |
| 4535 | patatin-like phospholipase family protein | |||
| 16245 | 224 aa hypothetical protein | |||
| 16250 | RM | Cdo002IV (99% identity) | GCMGAAG | Cdi43ORF16250P |
| 16255 | C | C.PdiZ31ORF415P (100% identity) | C.Cdi43ORF16250P | |
| 16260 | 53 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8230 | cell division protein | |||
| 8235 | R | CdiEW52McrBP (100% identity) | Cdi43McrBP | |
| 8240 | R | Pdi630McrCP (100% identity) | Cdi43McrCP | |
| 8245 | sigma 54-interacting transcriptional regulator | |||