Bifidobacterium bifidum lw02 |
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Putative Bifidobacterium bifidum lw02 RM systems
Ref: Wang,L. et al. unpublished
REBASE ref # 38548
Complete sequence: 2,272,336 bp
GenBank #: CP149430
REBASE acronym: Bbilw02
Org_num: 76774
All begin VZN89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3160 | 481 aa hypothetical protein | |||
| 3165 | M | M.BloInORF2900P (99% identity) | GAGNNNNNNRTTG | M.Bbilw02ORF3165P |
| 3170 | 257 aa hypothetical protein | |||
| 3175 | S | S.BloInORF2900P (99% identity) | GAGNNNNNNRTTG | S.Bbilw02ORF3165P |
| 3180 | Abi family protein | |||
| 3185 | R | BloInORF2900P (100% identity) | GAGNNNNNNRTTG | Bbilw02ORF3165P |
| 3190 | plasmid mobilization relaxosome protein MobC | |||
| 8255 | argininosuccinate lyase | |||
| 8260 | R | Bbi29521ORF1139P (99% identity) | Bbilw02ORF8275P | |
| 8265 | RNA-binding domain-containing protein | |||
| 8270 | S | S1.Blo10017I (64% identity) | S1.Bbilw02ORF8275P | |
| 8275 | M | M.PmeBin303ORFGP (99% identity) | M.Bbilw02ORF8275P | |
| ??? | S | S2.BbiDIIP (55% identity) | S2.Bbilw02ORF8275P | |
| 8295 | argininosuccinate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1470 | 228 aa hypothetical protein | |||
| 1475 | R | BspTKUORF1745P (99% identity) | TCCGGA | Bbilw02ORF1480P |
| 1480 | M | M.BspTKUORF1745P (99% identity) | TCCGGA | M.Bbilw02ORF1480P |
| 1485 | type II toxin-antitoxin system RelB/DinJ family | |||
| 2375 | BREX system P-loop protein BrxC | |||
| 2380 | M | BbiBF3ORF975P (47% identity) | M.Bbilw02ORF2380P | |
| 2385 | IS256 family transposase | |||
| 3320 | 140 aa hypothetical protein | |||
| 3325 | M | M.BbiS6ORF25P (100% identity) | M.Bbilw02ORF3325P | |
| 3330 | R | BbiS6ORF25P (100% identity) | Bbilw02ORF3325P | |
| 3335 | 181 aa hypothetical protein | |||
| 5205 | methyltransferase | |||
| 5210 | R | BbiBF3ORF626P (99% identity) | C | Bbilw02ORF5210P |
| 5215 | GTPase HflX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2760 | 45 aa hypothetical protein | |||
| 2765 | R | BspTKUORF615P (99% identity) | Bbilw02ORF2765P | |
| 2770 | (deoxy)nucleoside triphosphate | |||