Escherichia coli Z1323CEC0011 |
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Putative Escherichia coli Z1323CEC0011 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
| Sequence length: | GenBank #: | |
| Chromosome: | 5,254,009 bp | CP148440 |
| plasmid pZ1323CEC0011-3: | 109,962 bp | CP148442 |
| plasmid pZ1323CEC0011-4: | 100,245 bp | CP148443 |
REBASE acronym: EcoCEC0011
Org_num: 76637
All begin WHU71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1300 | transcription factor | |||
| 1305 | M | M.SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | M.EcoCEC0011ORF1305P |
| 1310 | S | S.SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | S.EcoCEC0011ORF1305P |
| 1315 | DUF262 domain-containing protein | |||
| 1320 | DUF262 domain-containing HNH endonuclease family | |||
| 1325 | R | SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | EcoCEC0011ORF1305P |
| 1330 | SprT family zinc-dependent metalloprotease | |||
| 2985 | endoribonuclease SymE | |||
| 2990 | S | S.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | S.EcoCEC0011ORF2995P |
| 2995 | M | M.Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | M.EcoCEC0011ORF2995P |
| 3000 | R | Ecos15955ORF12100P (100% identity) | RTCANNNNNNNCTTC | EcoCEC0011ORF2995P |
| 3005 | adenine/cytosine-specific restriction | |||
| plasmid pZ1323CEC0011-3 | ||||
| 27685 | SprT family zinc-dependent metalloprotease | |||
| 27690 | R | SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | EcoCEC0011ORF27710P |
| 27695 | DUF262 domain-containing HNH endonuclease family | |||
| 27700 | DUF262 domain-containing protein | |||
| 27705 | S | S.SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | S.EcoCEC0011ORF27710P |
| 27710 | M | M.SspS13ORF2650P (100% identity) | GGANNNNNNCTAY | M.EcoCEC0011ORF27710P |
| 27715 | transcription factor | |||
| 27850 | type II toxin-antitoxin system Phd/YefM family | |||
| 27855 | M | M.EcoPEC0001ORF25275P (100% identity) | M.EcoCEC0011ORF27855P | |
| 27860 | S | S.EcoPEC0001ORF25275P (99% identity) | S.EcoCEC0011ORF27855P | |
| 27865 | R | EcoPEC0001ORF25275P (99% identity) | EcoCEC0011ORF27855P | |
| 27870 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | 318 aa hypothetical protein | |||
| 25 | M | M.EcoSCU109ORF25P (100% identity) | M.EcoCEC0011ORF25P | |
| 30 | IS21-like element ISEc12 family transposase | |||
| 960 | 28 aa hypothetical protein | |||
| 965 | M | M.EcoPEC0001ORF7750P (100% identity) | M.EcoCEC0011ORF965P | |
| 970 | IS3 family transposase | |||
| 7675 | TraR/DksA family transcriptional regulator | |||
| 7680 | M | M.EcoPEC0001ORF980P (100% identity) | GATC | M.EcoCEC0011ORF7680P |
| 7685 | replication endonuclease | |||
| 9935 | phosphohydrolase | |||
| 9940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoCEC0011DcmP |
| 9945 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoCEC0011DcmP |
| 9950 | drug/metabolite exporter YedA | |||
| 12265 | IS3 family transposase | |||
| 12270 | M | M.SsoSE61ORF20220P (100% identity) | M.EcoCEC0011ORF12270P | |
| 12275 | 60 aa hypothetical protein | |||
| 15810 | NinE family protein | |||
| 15815 | M | M.EcoPEC0001ORF24880P (100% identity) | GATC | M.EcoCEC0011ORF15815P |
| 15820 | recombination protein NinB | |||
| 16195 | NinE family protein | |||
| 16200 | M | M.EcoPEC0001ORF18680P (100% identity) | GATC | M.EcoCEC0011ORF16200P |
| 16205 | recombination protein NinB | |||
| 18680 | PerC family transcriptional regulator | |||
| 18685 | M | M.Eco398BORFAP (98% identity) | M.EcoCEC0011ORF18685P | |
| 18690 | DUF1382 family protein | |||
| 23040 | DNA-binding transcriptional regulator Fis | |||
| 23045 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoCEC0011ORF23045P |
| 23050 | DUF2556 family protein | |||
| 23665 | ribulose-phosphate 3-epimerase | |||
| 23670 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoCEC0011DamP |
| 23675 | cell division protein DamX | |||
| plasmid pZ1323CEC0011-4 | ||||
| 28265 | 103 aa hypothetical protein | |||
| 28270 | M | M.EcoE2aORF26760P (100% identity) | SAY | M.EcoCEC0011ORF28270P |
| 28275 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3000 | type I restriction-modification system | |||
| 3005 | R | Ssp28760MrrP (100% identity) | EcoCEC0011MrrP | |
| 3010 | GTPase | |||
| 14395 | isocitrate/isopropylmalate family dehydrogenase | |||
| 14400 | R | Ecos15955McrCP (95% identity) | EcoCEC0011McrCP | |
| 14405 | R | EcoPEC0001McrBP (100% identity) | EcoCEC0011McrBP | |
| 14410 | tail fiber assembly protein | |||