Escherichia coli Z1323HEC0300 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli Z1323HEC0300 RM systems
Ref: Chae,J.-C. et al. unpublished
REBASE ref # 37751
Complete sequence: 4,803,929 bp
GenBank #: CP148366
REBASE acronym: Eco00
Org_num: 76621
All begin WHU13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2535 | DUF4917 family protein | |||
| 2540 | S | S2.Eco024ORF16070P (100% identity) | S2.Eco00ORF2545P | |
| 2545 | M | M.EcoTrh52ORF17690P (100% identity) | M.Eco00ORF2545P | |
| 2550 | S | S.EcoTrh52ORF17690P (99% identity) | S1.Eco00ORF2545P | |
| 2555 | R | EcoTrh52ORF17690P (100% identity) | Eco00ORF2545P | |
| 2560 | YgjP-like metallopeptidase domain-containing | |||
| 2690 | 428 aa hypothetical protein | |||
| 2695 | S | S.EcoTrh52ORF17850P (100% identity) | S.Eco00ORF2700P | |
| 2700 | M | M.SflFF71ORF17365P (100% identity) | M.Eco00ORF2700P | |
| 2705 | 128 aa hypothetical protein | |||
| 2955 | 237 aa hypothetical protein | |||
| 2960 | R | EcoTrh52ORF18120P (100% identity) | Eco00ORF2970P | |
| 2965 | S | S.EcoTrh52ORF18120P (100% identity) | S.Eco00ORF2970P | |
| 2970 | M | M.EcoS6400ORFDP (99% identity) | M.Eco00ORF2970P | |
| 2975 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2715 | AAA family ATPase | |||
| 2720 | R | EcoTrh52ORF17870P (99% identity) | Eco00ORF2720P | |
| 2725 | HNH endonuclease | |||
| 6955 | recombination protein NinB | |||
| 6960 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco00ORF6960P |
| 6965 | NinE family protein | |||
| 13160 | drug/metabolite exporter YedA | |||
| 13165 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco00DcmP |
| 13170 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco00DcmP |
| 13175 | phosphohydrolase | |||
| 20135 | DNA-binding transcriptional regulator Fis | |||
| 20140 | M | M.EcoBU03ORF6810P (100% identity) | ATGCAT | M.Eco00ORF20140P |
| 20145 | DUF2556 family protein | |||
| 20730 | ribulose-phosphate 3-epimerase | |||
| 20735 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco00DamP |
| 20740 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2560 | YgjP-like metallopeptidase domain-containing | |||
| 2565 | R | EcoTrh52MrrP (100% identity) | Eco00MrrP | |
| 2570 | GIY-YIG nuclease family protein | |||
| 2705 | 128 aa hypothetical protein | |||
| 2710 | R | EcoTrh52McrCP (100% identity) | Eco00McrCP | |
| 2715 | R | EcoTrh52McrBP (100% identity) | Eco00McrBP | |
| 2720 | HNH endonuclease | |||
| 2970 | class I SAM-dependent DNA methyltransferase | |||
| ??? | R | EcoTrh52GmrDP (100% identity) | Eco00GmrSDP | |
| 2985 | cell filamentation protein Fic | |||