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Putative Pseudomonas mendocina BD2 RM systems
Ref: Cao,G. unpublished
REBASE ref # 28456
Complete sequence: 4,757,970 bp
GenBank #: CP148074
REBASE acronym: PmeBD2
Org_num: 76541
All begin WG219_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5175 | 70 aa hypothetical protein | |||
5180 | M | M.Pst55ORF18855P (96% identity) | M.PmeBD2ORF5180P | |
5185 | S | S.XspAM6ORF15125P (57% identity) | S.PmeBD2ORF5180P | |
5190 | GIY-YIG nuclease family protein | |||
5195 | 166 aa hypothetical protein | |||
5200 | PIN domain-containing protein | |||
5205 | R | Pae097ORF11845P (96% identity) | PmeBD2ORF5180P | |
5210 | STY4851/ECs_5259 family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9840 | 322 aa hypothetical protein | |||
9845 | M | M.Sma27ORF21450P (53% identity) | M1.PmeBD2ORF9845P | |
9850 | 119 aa hypothetical protein | |||
9855 | M | M.PfrAS1ORF23200P (82% identity) | M2.PmeBD2ORF9845P | |
9860 | 3-5 exonuclease | |||
10915 | DUF262 domain-containing protein | |||
10920 | RM | Pae11450ORF4947AP (36% identity) | PmeBD2ORF10920P | |
10925 | BREX system P-loop protein BrxC | |||
15990 | DEAD/DEAH box helicase | |||
15995 | RM | PspMR3ORF5245P (80% identity) | PmeBD2ORF15995P | |
16000 | 523 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
14970 | ATP-dependent endonuclease | |||
14975 | R | Ssp11291ORF17885P (98% identity) | PmeBD2ORF14985P | |
14980 | Fic/DOC family N-terminal domain-containing | |||
14985 | M | M.PaeIMP13ORF10900P (98% identity) | M.PmeBD2ORF14985P | |
14990 | DUF4391 domain-containing protein |