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Putative Salmonella enterica subsp. enterica serovar Pomona CFSAN024552 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Sequence length: | GenBank #: | |
Chromosome: | 4,660,983 bp | CP147852 |
plasmid pCFSAN024552: | 110,917 bp | CP147853 |
REBASE acronym: Sen552
Org_num: 76590
All begin JYN06_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19540 | 322 aa hypothetical protein | |||
19545 | R | Sen10729IIP (100% identity) | CGAYNNNNNNNRTRTC | Sen552ORF19550P |
19550 | M | M.SenUA36ORF834P (100% identity) | CGAYNNNNNNNRTRTC | M.Sen552ORF19550P |
19555 | S | S.SenUA36ORF834P (100% identity) | CGAYNNNNNNNRTRTC | S.Sen552ORF19550P |
19560 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1665 | cell division protein DamX | |||
1670 | M | M.StyTDamP (100% identity) | GATC | M.Sen552DamP |
1675 | ribulose-phosphate 3-epimerase | |||
2155 | DUF2556 family protein | |||
2160 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen552ORF2160P |
2165 | DNA-binding transcriptional regulator Fis | |||
8760 | DUF1187 family protein | |||
8765 | M | M.Sens29945ORF12870P (100% identity) | M.Sen552ORF8765P | |
8770 | 77 aa hypothetical protein | |||
8895 | lysozyme | |||
8900 | M | M.Sen51401ORF13030P (78% identity) | M.Sen552ORF8900P | |
8905 | 55 aa hypothetical protein | |||
9085 | phosphohydrolase | |||
9090 | M | M.Sen3039DcmP (100% identity) | CCWGG | M.Sen552DcmP |
9095 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen552DcmP |
9100 | drug/metabolite exporter YedA | |||
14455 | phage holin | |||
14465 | S | S.Sen17963ORF14300P (98% identity) | S.Sen552ORF14470P | |
14470 | RM | Sen17963ORF14300P (100% identity) | Sen552ORF14470P | |
14475 | antiterminator Q family protein | |||
19680 | YebC/PmpR family DNA-binding transcriptional | |||
19685 | R | Ssp8103ORF19015P (100% identity) | Sen552ORF19685P | |
19690 | sce7725 family protein | |||
20535 | TA system toxin CbtA family protein | |||
20540 | M | M.Sen10729ORF6403P (95% identity) | M.Sen552ORF20540P | |
20545 | R | SenSARA26ORF20210P (100% identity) | CCGCGG | Sen552ORF20540P |
20550 | helix-turn-helix domain-containing protein | |||
plasmid pCFSAN024552 | ||||
23110 | 73 aa hypothetical protein | |||
23115 | M | M.Sen552ORF23300P (100% identity) | M.Sen552ORF23115P | |
23120 | 115 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17210 | small effector SsaA | |||
17215 | R | Sen7697ORF17040P (100% identity) | CAGAG | Sen552ORF17220P |
17220 | M | M.Sens29882ORF18310P (100% identity) | CAGAG | M.Sen552ORF17220P |
17225 | MFS transporter |