Escherichia coli GN06489 |
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Putative Escherichia coli GN06489 RM systems
Ref: Parsons,J.B. et al. Proc Natl Acad Sci U S A 121 (3), e2314514121 (2024)
REBASE ref # 38499
| Sequence length: | GenBank #: | |
| Chromosome: | 5,018,131 bp | CP147608 |
| plasmid unnamed1: | 107,409 bp | CP147609 |
| plasmid unnamed2: | 49,162 bp | CP147610 |
REBASE acronym: Eco489
Org_num: 76432
All begin WCU41_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco489ORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 6065 | PerC family transcriptional regulator | |||
| 6070 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco489ORF6070P |
| 6075 | LexA family transcriptional regulator | |||
| 9940 | phosphohydrolase | |||
| 9945 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco489DcmP |
| 9950 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco489DcmP |
| 9955 | drug/metabolite exporter YedA | |||
| 13225 | 39 aa hypothetical protein | |||
| 13245 | M | M.SboBSORF1444P (100% identity) | A | M.Eco489ORF13245P |
| 13250 | TrmB family transcriptional regulator | |||
| 20655 | McrC family protein | |||
| 20660 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco489ORF20665P |
| 20665 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.Eco489ORF20665P |
| 20670 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco489ORF20665P |
| 20675 | IS3 family transposase | |||
| 20935 | 174 aa hypothetical protein | |||
| 20940 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.Eco489ORF20940P |
| 20945 | ATP-binding protein | |||
| 20950 | response regulator receiver domain | |||
| 20955 | R | EcoSCU306ORF19130P (100% identity) | Eco489ORF20955P | |
| 20960 | 97 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 24900 | 101 aa hypothetical protein | |||
| 24905 | M | M.Sfl2142ORF380P (100% identity) | M.Eco489ORF24905P | |
| 24910 | 73 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25140 | 103 aa hypothetical protein | |||
| 25145 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco489ORF25145P |
| 25150 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6260 | recombinase family protein | |||
| 6265 | R | EspFAAGmrSDP (100% identity) | Eco489GmrSDP | |
| 6270 | DinI-like family protein | |||
| 20645 | glycosyltransferase family 2 protein | |||
| 20650 | R | EcosS3McrBP (100% identity) | Eco489McrBP | |
| 20655 | R | EcosS9McrCP (100% identity) | Eco489McrCP | |
| 20660 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14105 | NinE family protein | |||
| 14110 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco489ORF14110P |
| 14115 | recombination protein NinB | |||