Escherichia coli GN03449 |
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Putative Escherichia coli GN03449 RM systems
Ref: Parsons,J.B. et al. Proc Natl Acad Sci U S A 121 (3), e2314514121 (2024)
REBASE ref # 38499
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,928 bp | CP147526 |
| plasmid unnamed2: | 118,641 bp | CP147528 |
REBASE acronym: Eco449
Org_num: 76369
All begin WCU46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19115 | type IV toxin-antitoxin system AbiEi family | |||
| 19120 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco449ORF19125P |
| 19125 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco449ORF19125P |
| 19130 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco449ORF19125P |
| 19135 | 156 aa hypothetical protein | |||
| 20930 | restriction endonuclease | |||
| 20935 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco449ORF20935P |
| 20940 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco449ORF20935P |
| 20945 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco449ORF20935P |
| 20950 | endoribonuclease SymE | |||
| plasmid unnamed2 | ||||
| 25710 | IS1-like element IS1A family transposase | |||
| 25715 | M | M.SflFF34ORF9300P (74% identity) | M.Eco449ORF25715P | |
| 25720 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 485 | BREX-1 system phosphatase PglZ type A | |||
| 490 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco449ORF490P |
| 495 | BREX system P-loop protein BrxC | |||
| 2020 | cell division protein DamX | |||
| 2025 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco449DamP |
| 2030 | ribulose-phosphate 3-epimerase | |||
| 2620 | DUF2556 family protein | |||
| 2625 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco449ORF2625P |
| 2630 | DNA-binding transcriptional regulator Fis | |||
| 9790 | phosphohydrolase | |||
| 9795 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco449DcmP |
| 9800 | V | V.SflC32DcmP (74% identity) | CCWGG | V.Eco449DcmP |
| 9805 | drug/metabolite exporter YedA | |||
| 13345 | DUF3927 family protein | |||
| 13360 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco449ORF13360P |
| 13365 | TrmB family transcriptional regulator | |||
| 15610 | helix-turn-helix transcriptional regulator | |||
| 15615 | M | M.KpnYN1ORFGP (89% identity) | M.Eco449ORF15615P | |
| 15620 | 71 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 25440 | 103 aa hypothetical protein | |||
| 25445 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco449ORF25445P |
| 25450 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20925 | BrnT family toxin | |||
| 20930 | R | Ecou021MrrP (100% identity) | Eco449MrrP | |
| 20935 | class I SAM-dependent DNA methyltransferase | |||
| 21275 | glycosyltransferase family 2 protein | |||
| 21280 | R | EcosS3McrBP (100% identity) | Eco449McrBP | |
| 21285 | R | EcosS9McrCP (100% identity) | Eco449McrCP | |
| 21290 | Alw26I/Eco31I/Esp3I family type II restriction | |||