Escherichia coli MS 200-1 |
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Putative Escherichia coli MS 200-1 RM systems
Ref: Tsai,M.T. unpublished
REBASE ref # 38435
Complete sequence: 5,138,841 bp
GenBank #: CP146679
REBASE acronym: EcoMS2001
Org_num: 76175
All begin V9Z41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20720 | DUF262 domain-containing HNH endonuclease family | |||
| 20725 | R | EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | EcoMS2001ORF20730P |
| 20730 | M | M.EcosLF82ORF3455P (100% identity) | GGANNNNNNNNATGC | M.EcoMS2001ORF20730P |
| 20735 | S | S.EcosA32I (100% identity) | GGANNNNNNNNATGC | S.EcoMS2001ORF20730P |
| 20740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1735 | cell division protein DamX | |||
| 1740 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoMS2001DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2335 | DUF2556 family protein | |||
| 2340 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoMS2001ORF2340P |
| 2345 | DNA-binding transcriptional regulator Fis | |||
| 9760 | phosphohydrolase | |||
| 9765 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoMS2001DcmP |
| 9770 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoMS2001DcmP |
| 9775 | drug/metabolite exporter YedA | |||
| 20910 | HNH endonuclease | |||
| 20915 | R | Ecoi127aORF4076P (100% identity) | EcoMS2001ORF20915P | |
| 20920 | peptidase | |||
| 21215 | conjugal transfer protein TraG N-terminal | |||
| 21220 | M | M.EcosS3ORF15775P (100% identity) | M.EcoMS2001ORF21220P | |
| 21225 | R | EcosS3ORF15775P (100% identity) | EcoMS2001ORF21220P | |
| 21230 | response regulator receiver domain | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20740 | endoribonuclease SymE | |||
| ??? | R | EcoPnTigGmrSD2P (100% identity) | EcoMS2001GmrSDP | |
| 20755 | 26 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13790 | NinE family protein | |||
| 13795 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoMS2001ORF13795P |
| 13800 | recombination protein NinB | |||