Mycoplasmopsis cynos 87299 |
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Putative Mycoplasmopsis cynos 87299 RM systems
Ref: Framst,I. et al. unpublished
REBASE ref # 38004
Complete sequence: 1,001,741 bp
GenBank #: CP140753
REBASE acronym: Mcy87299
Org_num: 76116
All begin RRG60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2140 | 63 aa hypothetical protein | |||
| 2145 | S | S.Mcy85384ORF2840P (100% identity) | S.Mcy87299ORF2145P | |
| 2150 | helix-turn-helix domain-containing protein | |||
| 2655 | 64 aa hypothetical protein | |||
| 2660 | S | S2.Mcy94662ORF3265P (98% identity) | S2.Mcy87299ORF2665P | |
| 2665 | M | M.Mcy80950ORF3410P (99% identity) | M.Mcy87299ORF2665P | |
| 2670 | S | S3.Mcy64228ORF315P (25% identity) | S1.Mcy87299ORF2665P | |
| 2675 | R | Mcy85201ORF1360P (98% identity) | Mcy87299ORF2665P | |
| 2680 | site-specific integrase | |||
| 2685 | S | S1.Mcy30510ORF3070P (32% identity) | S3.Mcy87299ORF2665P | |
| 2690 | S | S.Mcy993aORF770P (29% identity) | S4.Mcy87299ORF2665P | |
| 2695 | 923 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | sigma factor-like helix-turn-helix DNA-binding | |||
| 125 | R | MgaIPTORF330P (42% identity) | Mcy87299ORF130P | |
| 130 | M | M.McaUFG1ORF638P (93% identity) | M.Mcy87299ORF130P | |
| 135 | 90 aa hypothetical protein | |||
| 520 | hypoxanthine phosphoribosyltransferase | |||
| 525 | M | M.Mcy94662ORF910P (100% identity) | M.Mcy87299ORF525P | |
| 530 | R | Mcy98999ORF1560P (99% identity) | Mcy87299ORF525P | |
| 535 | amino acid permease | |||
| 1080 | tyrosine-type recombinase/integrase | |||
| 1085 | M | M.Mcy98999ORF2340P (99% identity) | M.Mcy87299ORF1085P | |
| 1090 | DUF262 domain-containing protein | |||
| 1935 | 224 aa hypothetical protein | |||
| 1940 | M | M.Mcy97732ORF3000P (99% identity) | M.Mcy87299ORF1940P | |
| 1945 | 395 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3795 | FAD-dependent oxidoreductase | |||
| 3800 | R | Mcy98999ORF780P (100% identity) | Mcy87299ORF3805P | |
| 3805 | M | M.Mcy98999ORF780BP (78% identity) | M.Mcy87299ORF3805P | |
| 3810 | KilA-N domain-containing protein | |||
| 3825 | IS30 family transposase | |||
| 3830 | R | Mcy85384ORF3910P (99% identity) | Mcy87299ORF3835P | |
| ??? | M | M.Mcy85384ORF3850P (98% identity) | M.Mcy87299ORF3835P | |
| 3845 | lysine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2185 | IS3 family transposase | |||
| 2190 | R | McyMcrCP (99% identity) | Mcy87299McrCP | |
| 2195 | 98 aa hypothetical protein | |||
| 2200 | IS3 family transposase | |||
| 2205 | R | McyMcrBP (83% identity) | Mcy87299McrBP | |
| 2210 | 56 aa hypothetical protein | |||