Escherichia coli PA2 |
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Putative Escherichia coli PA2 RM systems
Ref: Gonzalez-Escalona,N. et al. unpublished
REBASE ref # 38404
| Sequence length: | GenBank #: | |
| Chromosome: | 5,412,736 bp | CP145944 |
| plasmid unnamed: | 92,846 bp | CP145945 |
REBASE acronym: EcosPA2
Org_num: 76046
All begin V6772_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12775 | endoribonuclease SymE | |||
| 12780 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.EcosPA2ORF12785P |
| 12785 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.EcosPA2ORF12785P |
| 12790 | R | EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | EcosPA2ORF12785P |
| 12795 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | LexA family transcriptional regulator | |||
| 1810 | M | M.Sso1099I (100% identity) | CTGCAG | M.EcosPA2ORF1810P |
| 1815 | R | Sso1099IP (100% identity) | CTGCAG | EcosPA2ORF1810P |
| 1820 | Rha family transcriptional regulator | |||
| 1945 | regulator | |||
| 1950 | M | M.EspP079ORF2847P (62% identity) | M.EcosPA2ORF1950AP | |
| 1955 | IS3-like element IS1203 family transposase | |||
| 1960 | M | M.Sso1099ORF735P (37% identity) | M.EcosPA2ORF1950BP | |
| 1965 | DUF1382 family protein | |||
| 6680 | DNA-binding transcriptional regulator Fis | |||
| 6685 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.EcosPA2ORF6685P |
| 6690 | DUF2556 family protein | |||
| 7195 | ribulose-phosphate 3-epimerase | |||
| 7200 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosPA2DamP |
| 7205 | cell division protein DamX | |||
| 11265 | 65 aa hypothetical protein | |||
| 11270 | M | M.EcosPA8ORF16100P (100% identity) | M.EcosPA2ORF11270P | |
| 11275 | Eae protein | |||
| 12515 | transposase | |||
| 12520 | R | EcosPA8ORF17350P (100% identity) | EcosPA2ORF12520P | |
| 12525 | N-acetylneuraminic acid mutarotase | |||
| 12555 | DEAD/DEAH box helicase | |||
| 12560 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | EcosPA2ORF12560P |
| 18855 | phosphohydrolase | |||
| 18860 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcosPA2DcmP |
| 18865 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.EcosPA2DcmP |
| 18870 | drug/metabolite exporter YedA | |||
| plasmid unnamed | ||||
| 27370 | 73 aa hypothetical protein | |||
| 27375 | M | M.EcosPA8ORF27775P (100% identity) | M.EcosPA2ORF27375P | |
| 27380 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12760 | DUF1127 domain-containing protein | |||
| ??? | R | EcosPA8GmrSDP (100% identity) | EcosPA2GmrSDP | |
| 12775 | endoribonuclease SymE | |||