Escherichia coli S1-CAM-01-A |
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Putative Escherichia coli S1-CAM-01-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 4,798,358 bp | CP145714 |
| plasmid p3-S1-CAM-01-A: | 95,144 bp | CP145710 |
| plasmid p4-S1-CAM-01-A: | 88,315 bp | CP145711 |
REBASE acronym: Eco01A
Org_num: 76048
All begin V6S25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23135 | IS1-like element IS1A family transposase | |||
| 23140 | S | S.Eco41C14ORF20990P (63% identity) | S.Eco01AORF23145P | |
| 23145 | M | M.SflFF17ORF19295P (100% identity) | M.Eco01AORF23145P | |
| 23150 | DUF4942 domain-containing protein | |||
| 23155 | IS1-like element IS1A family transposase | |||
| 23160 | IS1-like element IS1A family transposase | |||
| 23165 | R | SspS13ORF3745P (57% identity) | Eco01AORF23145P | |
| 23175 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4605 | cell division protein DamX | |||
| 4610 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco01ADamP |
| 4615 | ribulose-phosphate 3-epimerase | |||
| 5230 | DUF2556 family protein | |||
| 5235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco01AORF5235P |
| 5240 | DNA-binding transcriptional regulator Fis | |||
| 8235 | TraR/DksA family transcriptional regulator | |||
| 8240 | M | M.EcoS082ORF32760P (100% identity) | GATC | M.Eco01AORF8240P |
| 8245 | replication endonuclease | |||
| 11820 | phosphohydrolase | |||
| 11825 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco01ADcmP |
| 11830 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco01ADcmP |
| 11835 | drug/metabolite exporter YedA | |||
| 16345 | 92 aa hypothetical protein | |||
| 16350 | R | EcoZ910ORF13770P (100% identity) | GCCGGC | Eco01AORF16355P |
| 16355 | M | M.EcoZ910ORF13770P (100% identity) | GCCGGC | M.Eco01AORF16355P |
| 16360 | 34 aa hypothetical protein | |||
| 23100 | HNH endonuclease | |||
| 23105 | R | SflFF17ORF19275P (100% identity) | Eco01AORF23105P | |
| 23110 | McrC family protein | |||
| plasmid p3-S1-CAM-01-A | ||||
| 1360 | 24 aa hypothetical protein | |||
| 1365 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco01AORF1365P |
| 1370 | 73 aa hypothetical protein | |||
| plasmid p4-S1-CAM-01-A | ||||
| 1885 | 24 aa hypothetical protein | |||
| 1890 | M | M.Sso3885ORF23215P (99% identity) | SAY | M.Eco01AORF1890P |
| 1895 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23105 | HNH endonuclease | |||
| 23110 | R | SflFF17McrCP (100% identity) | Eco01AMcrCP | |
| 23115 | R | SflSTLE4McrBP (59% identity) | Eco01AMcrBP | |
| 23120 | IS5-like element IS903B family transposase | |||