Escherichia coli S1-IND-02-A |
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Putative Escherichia coli S1-IND-02-A RM systems
Ref: Campos-Madueno,E.I. et al. unpublished
REBASE ref # 38392
| Sequence length: | GenBank #: | |
| Chromosome: | 5,173,236 bp | CP145646 |
| plasmid p2-S1-IND-02-A: | 98,407 bp | CP145648 |
| plasmid p3-S1-IND-02-A: | 81,794 bp | CP145649 |
REBASE acronym: EcoD02A
Org_num: 76059
All begin V6S42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10070 | IS3 family transposase | |||
| 10075 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoD02AORF10075P |
| 10080 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoD02AORF10075P |
| 10085 | YecA family protein | |||
| 10090 | cold-shock protein | |||
| 10095 | R | Ecos142ORF9685P (99% identity) | GATGNNNNNNTAC | EcoD02AORF10075P |
| 10100 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1830 | cell division protein DamX | |||
| 1835 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD02ADamP |
| 1840 | ribulose-phosphate 3-epimerase | |||
| 2360 | DUF2556 family protein | |||
| 2365 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoD02AORF2365P |
| 2370 | DNA-binding transcriptional regulator Fis | |||
| 9805 | phosphohydrolase | |||
| 9810 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoD02ADcmP |
| 9815 | V | V.Ecos142DcmP (100% identity) | V.EcoD02ADcmP | |
| 9820 | drug/metabolite exporter YedA | |||
| 14330 | 39 aa hypothetical protein | |||
| 14350 | M | M.EcoC0426ORF18935P (100% identity) | M.EcoD02AORF14350P | |
| 14355 | TrmB family transcriptional regulator | |||
| 16010 | replication endonuclease | |||
| 16015 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoD02AORF16015P |
| 16020 | TraR/DksA family transcriptional regulator | |||
| 21210 | HNH endonuclease | |||
| 21215 | R | SflN116ORF19475P (100% identity) | EcoD02AORF21215P | |
| 21220 | 100 aa hypothetical protein | |||
| 21365 | BREX-1 system phosphatase PglZ type A | |||
| 21370 | RM | Eco64CCORF38720P (100% identity) | EcoD02AORF21370P | |
| 21375 | BREX system P-loop protein BrxC | |||
| 22955 | LexA family transcriptional regulator | |||
| 22960 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.EcoD02AORF22960P |
| 22965 | PerC family transcriptional regulator | |||
| plasmid p2-S1-IND-02-A | ||||
| 26535 | tellurite/colicin resistance protein | |||
| 26550 | M | M.Eco22ORF25785P (100% identity) | M.EcoD02AORF26550P | |
| 26555 | recombination-associated protein RdgC | |||
| plasmid p3-S1-IND-02-A | ||||
| 26785 | 97 aa hypothetical protein | |||
| 26790 | M | M.Xca80ORFEP (100% identity) | M.EcoD02AORF26790P | |
| 26795 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21220 | 100 aa hypothetical protein | |||
| 21225 | R | SflN116ORF19490P (100% identity) | GAACC | EcoD02AORF21230P |
| 21230 | M | M.SflN116ORF19490P (100% identity) | GAACC | M.EcoD02AORF21230P |
| 21235 | SNF2-related protein | |||