Pantoea agglomerans CFBP8785 |
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Putative Pantoea agglomerans CFBP8785 RM systems
Ref: Chesneau,G. et al. FEMS Microbiol Ecol 96 (12) (2020)
REBASE ref # 38300
Complete sequence: 4,328,092 bp
GenBank #: CP143410
REBASE acronym: Pag85
Org_num: 75582
All begin IFU16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3195 | nuclease | |||
| 3200 | S | S.Ecl515aORF3055P (61% identity) | S.Pag85ORF3205P | |
| 3205 | M | M.Pag1ORF3070P (97% identity) | M.Pag85ORF3205P | |
| 3210 | R | Peu24197ORF3065P (98% identity) | Pag85ORF3205P | |
| 4905 | 166 aa hypothetical protein | |||
| 4910 | R | Kco223ORF4355P (97% identity) | Pag85ORF4915P | |
| 4915 | M | M.PagSUH1ORF4510P (97% identity) | M.Pag85ORF4915P | |
| 4920 | S | S.PagSUH1ORF4510P (91% identity) | S.Pag85ORF4915P | |
| 4925 | 56 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1950 | SPOR domain-containing protein | |||
| 1955 | M | M.PagTx10DamP (99% identity) | GATC | M.Pag85DamP |
| 1960 | ribulose-phosphate 3-epimerase | |||
| 3300 | TraR/DksA family transcriptional regulator | |||
| 3305 | M | M.PagAR24ORF3605P (95% identity) | M.Pag85ORF3305P | |
| 3310 | replication endonuclease | |||
| 8320 | Arc family DNA-binding protein | |||
| 8325 | M | M.PagPa58DcmP (99% identity) | CCWGG | M.Pag85DcmP |
| 8330 | V | V.PagSUH1DcmP (99% identity) | V.Pag85DcmP | |
| 8335 | 91 aa hypothetical protein | |||
| 15940 | 98 aa hypothetical protein | |||
| 15945 | M | M.Psp351ORF4510P (82% identity) | M.Pag85ORF15945P | |
| 15950 | recombination protein NinB | |||
| 20305 | helix-turn-helix transcriptional regulator | |||
| 20310 | M | M.Yru159ORF11025P (85% identity) | M.Pag85ORF20310P | |
| 20315 | 131 aa hypothetical protein | |||