Azotobacter vinelandii DJ |
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Putative Azotobacter vinelandii DJ RM systems
Ref: Russell,S.J. et al. mSystems (2024) In press
REBASE ref #
| Sequence length: | GenBank #: | |
| Chromosome: | 5,373,656 bp | CP144736 |
| Chromosome: | 5,374,382 bp | CP144734 |
| Chromosome: | 5,374,411 bp | CP144733 |
REBASE acronym:
Org_num:
All begin SF175_, V4939_, V4941_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3435 | cation-transporting P-type ATPase | |||
| ??? | RM | AviJORF9790P (100% identity) | AvisD3aORF3440P | |
| 3450 | AAA family ATPase | |||
| 21920 | 447 aa hypothetical protein | |||
| 21925 | V | V.AviJORF15925P (100% identity) | V.AvisD3aORF21930P | |
| 21930 | M | M.AviJORF15925P (100% identity) | M.AvisD3aORF21930P | |
| 21935 | DNA repair protein RadC | |||
| Chromosome | ||||
| 12285 | 447 aa hypothetical protein | |||
| 12290 | V | V.AvisD3aORF21930P (100% identity) | V.AviDJbORF12295P | |
| 12295 | M | M.AvisD3aORF21930P (100% identity) | M.AviDJbORF12295P | |
| 12300 | DNA repair protein RadC | |||
| 18415 | cation-transporting P-type ATPase | |||
| ??? | RM | AvisD3aORF3440P (100% identity) | AviDJbORF18420P | |
| 18430 | AAA family ATPase | |||
| Chromosome | ||||
| 9780 | AAA family ATPase | |||
| ??? | RM | AvisD3aORF3440P (100% identity) | AviJORF9790P | |
| 9795 | cation-transporting P-type ATPase | |||
| 15920 | DNA repair protein RadC | |||
| 15925 | M | M.AvisD3aORF21930P (100% identity) | M.AviJORF15925P | |
| 15930 | V | V.AvisD3aORF21930P (100% identity) | V.AviJORF15925P | |
| 15935 | 447 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2700 | mobilization protein | |||
| ??? | R | AviCAORF24470P (100% identity) | AvisD3aORF2715P | |
| 2715 | M | M.AviJORF10515P (100% identity) | M.AvisD3aORF2715P | |
| 2720 | transcriptional regulator | |||
| Chromosome | ||||
| 4545 | ATP-binding protein | |||
| 4550 | M | M.AvisD3aORF14180P (100% identity) | M.AviDJbORF4550P | |
| 4555 | virulence RhuM family protein | |||
| 4560 | R | AvisD3aORF14180P (100% identity) | AviDJbORF4550P | |
| 4565 | phage integrase N-terminal domain-containing | |||
| 17680 | mobilization protein | |||
| ??? | R | AvisD3aORF2715P (99% identity) | AviDJbORF17695P | |
| 17695 | M | M.AvisD3aORF2715P (100% identity) | M.AviDJbORF17695P | |
| 17700 | transcriptional regulator | |||
| Chromosome | ||||
| 10510 | transcriptional regulator | |||
| 10515 | M | M.AvisD3aORF2715P (100% identity) | M.AviJORF10515P | |
| 10520 | R | AviAORF6788P (100% identity) | AviJORF10515P | |
| 10525 | 135 aa hypothetical protein | |||
| 23675 | phage integrase N-terminal domain-containing | |||
| 23680 | R | AvisD3aORF14180P (100% identity) | AviJORF23690P | |
| 23685 | virulence RhuM family protein | |||
| 23690 | M | M.AvisD3aORF14180P (100% identity) | M.AviJORF23690P | |
| 23695 | ATP-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12205 | metallophosphoesterase | |||
| 12210 | R | AviJMrrP (100% identity) | AvisD3aMrrP | |
| 12215 | WYL domain-containing protein | |||
| 14150 | helix-turn-helix domain-containing protein | |||
| 14155 | R | AviJMrr2P (100% identity) | AvisD3aMrr2P | |
| 14160 | SNF2-related protein | |||
| Chromosome | ||||
| 4520 | helix-turn-helix domain-containing protein | |||
| 4525 | R | AvisD3aMrr2P (100% identity) | AviDJbMrr2P | |
| 4530 | SNF2-related protein | |||
| Chromosome | ||||
| 23710 | SNF2-related protein | |||
| 23715 | R | AvisD3aMrr2P (100% identity) | AviJMrr2P | |
| 23720 | helix-turn-helix domain-containing protein | |||