Riemerella anatipestifer RA-3M |
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Putative Riemerella anatipestifer RA-3M RM systems
Ref: Bai,N. unpublished
REBASE ref # 38329
Complete sequence: 2,127,058 bp
GenBank #: CP144351
REBASE acronym: RanRA3M
Org_num: 75691
All begin V2H88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8900 | IS982-like element ISRa1 family transposase | |||
| 8905 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.RanRA3MORF8905P |
| 8910 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.RanRA3MORF8905P |
| 8915 | R | RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | RanRA3MORF8905P |
| 8920 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2715 | universal stress protein | |||
| 2720 | M | M.RanYMDndCP (100% identity) | GAAC | M.RanRA3MDndCP |
| 2725 | DNA sulfur modification protein DndD | |||
| 2720 | DNA phosphorothioation system sulfurtransferase | |||
| 2725 | M | M.RanYMDndDP (100% identity) | GAAC | M.RanRA3MDndDP |
| 2730 | DndE family protein | |||
| 2725 | DNA sulfur modification protein DndD | |||
| 2730 | M | M.RanYMDndEP (100% identity) | GAAC | M.RanRA3MDndEP |
| 2735 | HmuY family protein | |||
| 7465 | 162 aa hypothetical protein | |||
| 7470 | R | RanYb2ORF4780P (100% identity) | GAATTC | RanRA3MORF7475P |
| 7475 | M | M.RanYb2ORF4780P (100% identity) | GAATTC | M.RanRA3MORF7475P |
| 7480 | BadF/BadG/BcrA/BcrD ATPase family protein | |||
| 9190 | 187 aa hypothetical protein | |||
| 9195 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M1.RanRA3MORF9195P |
| 9200 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M2.RanRA3MORF9195P |
| 9205 | R | RanYb2ORF9550P (100% identity) | GGATG | RanRA3MORF9195P |
| 9210 | DNA-binding domain-containing protein | |||
| 9410 | 125 aa hypothetical protein | |||
| 9415 | M | M1.RanYb2ORF9770P (100% identity) | GATC | M.RanRA3MORF9415P |
| 9420 | type II restriction endonuclease | |||
| 9415 | DNA adenine methylase | |||
| 9420 | R | RanYb2ORF9770P (100% identity) | GATC | RanRA3MORF9425P |
| 9425 | M | M.RanY11ORF9010P (100% identity) | M.RanRA3MORF9425P | |
| 9430 | GTPase | |||