Phocaeicola vulgatus DFI.4.81 |
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Putative Phocaeicola vulgatus DFI.4.81 RM systems
Ref: Lin,H. et al. unpublished
REBASE ref # 38202
Complete sequence: 5,293,715 bp
GenBank #: CP143952
REBASE acronym: Pvu1
Org_num: 75600
All begin V3C07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22290 | fimbrillin family protein | |||
| 22295 | S | S1.BvumpkORF3684P (100% identity) | S3.Pvu1ORF22320P | |
| 22300 | tyrosine-type recombinase/integrase | |||
| 22305 | restriction endonuclease subunit S | |||
| 22310 | S | S4.BvumpkORF3684P (96% identity) | S2.Pvu1ORF22320P | |
| 22315 | S | S1.PvuC06ORF3690P (99% identity) | S1.Pvu1ORF22320P | |
| 22320 | M | M.Pvu3C24ORF1046P (100% identity) | M.Pvu1ORF22320P | |
| 22325 | R | BvumpkORF3684P (100% identity) | Pvu1ORF22320P | |
| 22330 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5735 | 186 aa hypothetical protein | |||
| 5740 | M | M1.PmeBin57ORFGP (100% identity) | M1.Pvu1ORF5740P | |
| 5745 | R | PmeBin57ORFGP (97% identity) | Pvu1ORF5740P | |
| 5750 | M | M2.PmeBin57ORFGP (100% identity) | GATC | M2.Pvu1ORF5740P |
| 5755 | MobV family relaxase | |||
| 6730 | helicase-related protein | |||
| 6735 | RM | PmeBin178ORFBP (100% identity) | Pvu1ORF6735P | |
| 6740 | TaqI-like C-terminal specificity | |||
| 8520 | 68 aa hypothetical protein | |||
| 8525 | M | M.Bov179ORF19595P (99% identity) | M.Pvu1ORF8525P | |
| 8530 | 154 aa hypothetical protein | |||
| 10420 | 57 aa hypothetical protein | |||
| 10425 | M | M.Pvu626ORF3090P (99% identity) | M.Pvu1ORF10425P | |
| 10430 | thymidylate synthase | |||
| 10940 | thymidylate synthase | |||
| 10945 | M | M.Pvu191ORF14700P (100% identity) | M.Pvu1ORF10945P | |
| 10950 | response regulator | |||
| 12690 | 80 aa hypothetical protein | |||
| 12695 | M | M.Bdo5136ORF1570P (96% identity) | M.Pvu1ORF12695P | |
| 12700 | 134 aa hypothetical protein | |||
| 20015 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 20020 | M | M.Uph2207ORFAP (100% identity) | M.Pvu1ORF20020P | |
| 20025 | thymidylate synthase | |||
| 20550 | 59 aa hypothetical protein | |||
| 20555 | RM | Bvi18177ORF3790P (95% identity) | Pvu1ORF20560P | |
| 20560 | M | M.Bvi18177ORF3790P (97% identity) | M.Pvu1ORF20560P | |
| 20565 | site-specific integrase | |||
| 20815 | restriction endonuclease subunit M | |||
| 20820 | RM | Pdo2ORF15805P (70% identity) | Pvu1ORF20820P | |
| 20825 | DUF6078 family protein | |||