Parabacteroides distasonis DFI.5.23 |
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Putative Parabacteroides distasonis DFI.5.23 RM systems
Ref: Lin,H. et al. unpublished
REBASE ref # 38202
Complete sequence: 5,244,786 bp
GenBank #: CP143949
REBASE acronym: Pdi3
Org_num: 75585
All begin V3C16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12380 | DUF2971 domain-containing protein | |||
| 12385 | S | S1.BovC20ORF1292P (97% identity) | S.Pdi3ORF12400P | |
| 12390 | 100 aa hypothetical protein | |||
| 12395 | virulence RhuM family protein | |||
| 12400 | M | M.Pdi615ORF2620P (99% identity) | M.Pdi3ORF12400P | |
| 12405 | R | Pdi615ORF2620P (100% identity) | Pdi3ORF12400P | |
| 12410 | C | C.BfrIHMA4ORF21005P (100% identity) | C.Pdi3ORF12400P | |
| 12415 | antitoxin VbhA family protein | |||
| 12495 | DUF6078 family protein | |||
| 12500 | R | PdiGP102ORF12805P (100% identity) | Pdi3ORF12515P | |
| 12505 | S | S.PdiGP102ORF12805P (98% identity) | S.Pdi3ORF12515P | |
| 12510 | AAA family ATPase | |||
| 12515 | M | M.PdiS2PDORF3410P (100% identity) | M.Pdi3ORF12515P | |
| 12520 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7035 | conjugal transfer protein TraO | |||
| 7040 | M | M.PdiGP102ORF7310P (100% identity) | M.Pdi3ORF7040P | |
| 7045 | DUF3872 domain-containing protein | |||
| 15340 | DUF6383 domain-containing protein | |||
| 15345 | M | M.PspCT06II (100% identity) | CCWGG | M.Pdi3ORF15345P |
| 15350 | helix-turn-helix domain-containing protein | |||
| 15355 | R | PspCT06IIP (100% identity) | CCWGG | Pdi3ORF15345P |
| 15360 | PCMD domain-containing protein | |||
| 16910 | fructose-6-phosphate aldolase | |||
| 16915 | M | M.Pdi238ORF18650P (100% identity) | CGCG | M.Pdi3ORF16915P |
| 16920 | 216 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10310 | 100 aa hypothetical protein | |||
| 10315 | R | Pdi574ORF2455P (99% identity) | Pdi3ORF10320P | |
| 10320 | M | M.Pdi574ORF2455P (100% identity) | M.Pdi3ORF10320P | |
| 10325 | 274 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12340 | mobilization protein | |||
| 12345 | R | Pdi157MrrP (97% identity) | Pdi3MrrP | |
| 12350 | helix-turn-helix domain-containing protein | |||