Escherichia coli FJ_Ec_21 |
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Putative Escherichia coli FJ_Ec_21 RM systems
Ref: Zhou,L. et al. unpublished
REBASE ref # 38212
| Sequence length: | GenBank #: | |
| Chromosome: | 4,701,011 bp | CP143627 |
| plasmid pZBEC21_01: | 95,336 bp | CP143628 |
REBASE acronym: EcoJEc21
Org_num: 75251
All begin V2I96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19475 | restriction endonuclease | |||
| 19480 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoJEc21ORF19480P |
| 19485 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoJEc21ORF19480P |
| 19490 | R | EcoJH51ORF19645P (100% identity) | RTACNNNNGTG | EcoJEc21ORF19480P |
| 19495 | endoribonuclease SymE | |||
| plasmid pZBEC21_01 | ||||
| 23115 | type II toxin-antitoxin system Phd/YefM family | |||
| 23120 | M | M.Eco184ORF24930P (99% identity) | M.EcoJEc21ORF23120P | |
| 23125 | S | S.EcoCEC0011ORF27855P (66% identity) | S.EcoJEc21ORF23120P | |
| 23130 | R | Eal36ORF24105P (98% identity) | EcoJEc21ORF23120P | |
| 23135 | 3-phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1700 | cell division protein DamX | |||
| 1705 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoJEc21DamP |
| 1710 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoJEc21ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 5400 | TraR/DksA family transcriptional regulator | |||
| 5405 | M | M.SflLIN17ORF14475P (99% identity) | GATC | M.EcoJEc21ORF5405P |
| 5410 | replication endonuclease | |||
| 8890 | HD domain-containing protein | |||
| 8895 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.EcoJEc21DcmP |
| 8900 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.EcoJEc21DcmP |
| 8905 | drug/metabolite exporter YedA | |||
| plasmid pZBEC21_01 | ||||
| 23215 | 137 aa hypothetical protein | |||
| 23225 | M | M.EcoD6117ORF70P (99% identity) | M.EcoJEc21ORF23225P | |
| 23230 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13075 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13080 | R | Ecos15955McrCP (95% identity) | EcoJEc21McrCP | |
| 13085 | R | Ecos15955McrBP (100% identity) | EcoJEc21McrBP | |
| 13090 | tail fiber assembly protein | |||
| 19470 | BrnT family toxin | |||
| 19475 | R | Ecou021MrrP (100% identity) | EcoJEc21MrrP | |
| 19480 | class I SAM-dependent DNA methyltransferase | |||