Roseburia species 499 |
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Putative Roseburia species 499 RM systems
Ref: Trachsel,J. et al. Appl Environ Microbiol 82 (22), 6788-6798 (2016)
REBASE ref # 38330
Complete sequence: 3,381,825 bp
GenBank #: CP135164
REBASE acronym: Rsp499
Org_num: 75692
All begin BIV20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2520 | helix-turn-helix transcriptional regulator | |||
| 2525 | M | M.PmeBin45ORFEP (94% identity) | M.Rsp499ORF2525P | |
| 2530 | PIN domain-containing protein | |||
| 2535 | S | S1.CsySt65ORF5050P (66% identity) | S1.Rsp499ORF2525P | |
| 2540 | S | S3.Lba902ORFBP (47% identity) | S2.Rsp499ORF2525P | |
| 2545 | 90 aa hypothetical protein | |||
| 2550 | tyrosine-type recombinase/integrase | |||
| 2555 | S | S3.PmeBin111ORFDP (47% identity) | S3.Rsp499ORF2525P | |
| 2560 | 392 aa hypothetical protein | |||
| 2565 | R | PmeBin45ORFEP (88% identity) | Rsp499ORF2525P | |
| 2570 | DUF262 and DUF1524 domain-containing protein | |||
| 10490 | ABC transporter permease | |||
| 10495 | R | PmeBin77ORFEP (64% identity) | Rsp499ORF10535P | |
| 10500 | helix-turn-helix transcriptional regulator | |||
| 10505 | VOC family protein | |||
| 10510 | GNAT family N-acetyltransferase | |||
| 10515 | tyrosine-type recombinase/integrase | |||
| 10520 | 156 aa hypothetical protein | |||
| 10525 | DUF3990 domain-containing protein | |||
| 10530 | S | S.Csp502ORF2621P (48% identity) | S.Rsp499ORF10535P | |
| 10535 | M | M.EreFMUORF4225P (86% identity) | M.Rsp499ORF10535P | |
| 10540 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1550 | plasmid recombination protein | |||
| 1555 | R | PmeBin110ORFEP (95% identity) | Rsp499ORF1560P | |
| 1560 | M | M.Rsp69ORF3810P (96% identity) | M.Rsp499ORF1560P | |
| 1565 | 73 aa hypothetical protein | |||
| 11740 | 466 aa hypothetical protein | |||
| 11745 | RM | PmeBin413ORFAP (50% identity) | Rsp499ORF11745P | |
| 11750 | BREX system P-loop protein BrxC | |||
| 16350 | DUF1778 domain-containing protein | |||
| 16355 | M | M.PmeBin141ORFDP (93% identity) | M.Rsp499ORF16355P | |
| 16360 | 154 aa hypothetical protein | |||
| 16365 | R | R2.PmeBin201ORFCP (48% identity) | Rsp499ORF16355P | |
| 16370 | P-loop NTPase fold protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1425 | class I SAM-dependent methyltransferase | |||
| 1430 | R | Lba9ORF1005P (73% identity) | Rsp499ORF1430P | |
| 1435 | helix-turn-helix transcriptional regulator | |||
| 2565 | type I restriction endonuclease subunit R | |||
| 2570 | R | TphT320AGmrSDP (81% identity) | Rsp499GmrSDP | |
| 2575 | reverse transcriptase/maturase family protein | |||