|
Putative Pantoea agglomerans CFBP8774 RM systems
Ref: Chesneau,G. et al. FEMS Microbiol Ecol 96 (12) (2020)
REBASE ref # 38300
Sequence length: | GenBank #: | |
Chromosome: | 4,331,596 bp | CP143407 |
plasmid punamed3: | 149,927 bp | CP143405 |
plasmid punamed4: | 116,764 bp | CP143409 |
REBASE acronym: Pag4
Org_num: 75581
All begin IFU02_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
6065 | SPOR domain-containing protein | |||
6070 | M | M.PagY03DamP (100% identity) | GATC | M.Pag4DamP |
6075 | ribulose-phosphate 3-epimerase | |||
7780 | phosphoadenosine phosphosulfate reductase family | |||
7785 | M | M.Pag21ORF15510P (98% identity) | M.Pag4ORF7785P | |
7790 | TraR/DksA C4-type zinc finger protein | |||
9130 | IS3 family transposase | |||
9135 | RM | Vga43942II (85% identity) | Pag4ORF9135P | |
9140 | S | S.PmuX2ORFHP (34% identity) | S.Pag4ORF9135P | |
9145 | integrase arm-type DNA-binding domain-containing | |||
12090 | Arc family DNA-binding protein | |||
12095 | M | M.PagSDcmP (99% identity) | CCWGG | M.Pag4DcmP |
12100 | V | V.PanGB1DcmP (100% identity) | V.Pag4DcmP | |
12105 | 91 aa hypothetical protein | |||
16250 | DUF1364 domain-containing protein | |||
16255 | M | M.Esp617ORF26580P (83% identity) | M.Pag4ORF16255P | |
16260 | DUF1367 family protein | |||
17130 | 61 aa hypothetical protein | |||
17135 | M | M.PagCB1ORF5865P (88% identity) | M.Pag4ORF17135P | |
17140 | 84 aa hypothetical protein | |||
17780 | phage portal protein | |||
17785 | R | PagPa58ORF3830P (97% identity) | Pag4ORF17790P | |
17790 | M | M.PagPa58ORF3830P (97% identity) | M1.Pag4ORF17790P | |
17795 | DinI-like family protein | |||
17800 | 61 aa hypothetical protein | |||
17805 | replication endonuclease | |||
17810 | 139 aa hypothetical protein | |||
17815 | M | M.Pag8241ORF410P (92% identity) | M2.Pag4ORF17790P | |
17820 | TraR/DksA family transcriptional regulator | |||
20015 | Dam family site-specific | |||
20020 | M | M.KoxNIH4ORF30305P (55% identity) | M.Pag4ORF20020P | |
20025 | replication endonuclease | |||
20780 | antitermination protein | |||
20785 | M | M.PagPa58ORF4520P (89% identity) | M.Pag4ORF20785P | |
20790 | recombination protein NinG | |||
20955 | 83 aa hypothetical protein | |||
20960 | M | M.Pag00ORF7555P (100% identity) | M.Pag4ORF20960P | |
20965 | site-specific integrase | |||
22855 | DUF6079 family protein | |||
22860 | M | M.KquPF9ORF22810P (78% identity) | M.Pag4ORF22860P | |
22865 | R | KquB4H16ORF23295P (98% identity) | Pag4ORF22860P | |
22870 | BREX-3 system phosphatase PglZ | |||
plasmid punamed3 | ||||
3140 | enoyl-CoA hydratase/isomerase family protein | |||
3145 | M | M.Pag85ORF23595P (73% identity) | M.Pag4ORF3145P | |
3150 | IS5 family transposase | |||
plasmid punamed4 | ||||
26295 | 78 aa hypothetical protein | |||
26300 | M | M.PagAR24ORF23075P (100% identity) | M.Pag4ORF26300P | |
26305 | 76 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20010 | 74 aa hypothetical protein | |||
20015 | M | M.Pag124ORF10375P (84% identity) | M.Pag4ORF20015P | |
20020 | DNA cytosine methyltransferase |