Escherichia coli B20123 |
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Putative Escherichia coli B20123 RM systems
Ref: Maguire,M. unpublished
REBASE ref # 38210
| Sequence length: | GenBank #: | |
| Chromosome: | 5,138,724 bp | CP142930 |
| plasmid pB20123_1: | 148,373 bp | CP142931 |
| plasmid pB20123_2: | 112,121 bp | CP142932 |
REBASE acronym: Eco0123
Org_num: 75243
All begin VYI63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6470 | GTPase family protein | |||
| 6475 | M | M.EcosS1ORF17110P (100% identity) | M.Eco0123ORF6475P | |
| 6480 | S | S.EcosS1ORF17110P (100% identity) | S.Eco0123ORF6475P | |
| 6485 | R | EcosEC2ORF13930P (100% identity) | Eco0123ORF6475P | |
| 6490 | 75 aa hypothetical protein | |||
| 12410 | 322 aa hypothetical protein | |||
| 12415 | R | SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | Eco0123ORF12420P |
| 12420 | M | M.SspS13ORF3945P (100% identity) | AAGNNNNNNNRTDCC | M.Eco0123ORF12420P |
| 12425 | S | S.SflC32ORFCP (100% identity) | AAGNNNNNNNRTDCC | S.Eco0123ORF12420P |
| 12430 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5000 | 39 aa hypothetical protein | |||
| 5020 | M | M.EcoY26ORF70P (100% identity) | A | M.Eco0123ORF5020P |
| 5025 | TrmB family transcriptional regulator | |||
| 10310 | MAE_28990/MAE_18760 family HEPN-like nuclease | |||
| 10315 | R | Ecos67ORF8885P (100% identity) | Eco0123ORF10320P | |
| 10320 | M | M.Ecos67ORF8885P (100% identity) | M.Eco0123ORF10320P | |
| 10325 | 59 aa hypothetical protein | |||
| 18165 | cell division protein DamX | |||
| 18170 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco0123DamP |
| 18175 | ribulose-phosphate 3-epimerase | |||
| 18765 | DUF2556 family protein | |||
| 18770 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco0123ORF18770P |
| 18775 | DNA-binding transcriptional regulator Fis | |||
| 22960 | DUF1382 family protein | |||
| 22965 | M | M.EcosalpORF20815P (100% identity) | GATC | M.Eco0123ORF22965P |
| 22970 | PerC family transcriptional regulator | |||
| 25220 | PerC family transcriptional regulator | |||
| 25225 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco0123ORF25225P |
| 25230 | LexA family transcriptional regulator | |||
| plasmid pB20123_1 | ||||
| 26125 | 73 aa hypothetical protein | |||
| 26130 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco0123ORF26130P |
| 26135 | 103 aa hypothetical protein | |||
| plasmid pB20123_2 | ||||
| 26395 | 101 aa hypothetical protein | |||
| 26400 | M | M.Sso866ORF27155P (100% identity) | M.Eco0123ORF26400P | |
| 26405 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12430 | endoribonuclease SymE | |||
| ??? | R | Ecos137GmrSDP (100% identity) | Eco0123GmrSDP | |
| 12445 | Rpn family recombination-promoting | |||