Pseudomonas aeruginosa F001 |
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Putative Pseudomonas aeruginosa F001 RM systems
Ref: Kyrkou,I. et al. unpublished
REBASE ref # 38188
Complete sequence: 6,967,503 bp
GenBank #: CP115482
REBASE acronym: PaeF001
Org_num: 75626
All begin PCP62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17330 | tyrosine-type recombinase/integrase | |||
| 17335 | R | PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | PaeF001ORF17355P |
| 17340 | S | S.PaeRN21ORF2494P (100% identity) | AAGNNNNNNCTGG | S.PaeF001ORF17355P |
| 17345 | AAA family ATPase | |||
| 17350 | 270 aa hypothetical protein | |||
| 17355 | M | M.PspAK6UORFGP (100% identity) | AAGNNNNNNCTGG | M.PaeF001ORF17355P |
| 17360 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8395 | ATP-binding protein | |||
| 8400 | M | M.PspAK6UORFHP (100% identity) | M.PaeF001ORF8400P | |
| 8405 | R | PaePALA39ORF724P (100% identity) | PaeF001ORF8400P | |
| 8410 | V | V.PaeRN21ORF739P (100% identity) | V.PaeF001ORF8400P | |
| 8415 | 233 aa hypothetical protein | |||
| 16565 | 185 aa hypothetical protein | |||
| 16570 | M | M.Ssp405ORF8290P (100% identity) | M.PaeF001ORF16570P | |
| 16575 | DNA topoisomerase III | |||
| 26380 | Com family DNA-binding transcriptional | |||
| 26385 | M | M.PaesPA3ORF29655P (100% identity) | M.PaeF001ORF26385P | |
| 26390 | FUSC family protein | |||
| 28095 | nucleoid-associated protein YejK | |||
| 28100 | M | M.PspHORFAP (100% identity) | M.PaeF001ORF28100P | |
| 28105 | Arc family DNA-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30055 | transposase | |||
| 30060 | M | M.PaePALA14ORF2040P (98% identity) | M.PaeF001ORF30060P | |
| 30065 | R | PaePALA14ORF2040P (100% identity) | PaeF001ORF30060P | |
| 30070 | AAA family ATPase | |||
| 32745 | 44 aa hypothetical protein | |||
| 32750 | R | PaeF078ORF6215P (100% identity) | PaeF001ORF32755P | |
| 32755 | M | M.PaeF078ORF6215P (100% identity) | M.PaeF001ORF32755P | |
| 32760 | 330 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17355 | class I SAM-dependent DNA methyltransferase | |||
| 17360 | R | PaeR031MrrP (100% identity) | PaeF001MrrP | |
| 17365 | AlpA family transcriptional regulator | |||