Rhizobium johnstonii TP5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Rhizobium johnstonii TP5 RM systems
Ref: Andronov,E. et al. unpublished
REBASE ref # 38175
| Sequence length: | GenBank #: | |
| Chromosome: | 5,005,645 bp | CP140819 |
| plasmid pRlX4: | 687,424 bp | CP140823 |
REBASE acronym: RjoTP5
Org_num: 74270
All begin U8P72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5815 | 119 aa hypothetical protein | |||
| 5820 | S | S.RleVORF1098P (100% identity) | S.RjoTP5ORF5825P | |
| 5825 | M | M.RleVORF1098P (100% identity) | M.RjoTP5ORF5825P | |
| 5830 | R | RjoTP25ORF5855P (99% identity) | RjoTP5ORF5825P | |
| 5835 | DUF5655 domain-containing protein | |||
| plasmid pRlX4 | ||||
| 31085 | HNH endonuclease | |||
| 31090 | R | RleVORF98P (100% identity) | RjoTP5ORF31105P | |
| 31095 | FRG domain-containing protein | |||
| 31100 | S | S.RleVORF98P (100% identity) | S.RjoTP5ORF31105P | |
| 31105 | M | M.RleVORF98P (100% identity) | M.RjoTP5ORF31105P | |
| 31110 | DUF4917 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11615 | HlyD family type I secretion periplasmic adaptor | |||
| 11620 | M | M.Rle127ORF11065P (94% identity) | M.RjoTP5ORF11620P | |
| 11625 | 68 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11890 | 60 aa hypothetical protein | |||
| 11895 | R | Rsp007McrBP (25% identity) | RjoTP5McrBP | |
| 11900 | R | Rsp007McrCP (61% identity) | RjoTP5McrCP | |
| 11905 | 140 aa hypothetical protein | |||
| plasmid pRlX4 | ||||
| 31115 | 189 aa hypothetical protein | |||
| 31120 | R | RleVGmrSDP (100% identity) | RjoTP5GmrSDP | |
| 31125 | 206 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5695 | antibiotic biosynthesis monooxygenase | |||
| 5700 | M | M.RleVORF1075P (100% identity) | GANTC | M.RjoTP5ORF5700P |
| 5705 | nuclear transport factor 2 family protein | |||