Escherichia coli Case 3 |
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Putative Escherichia coli Case 3 RM systems
Ref: Hans,J.B. unpublished
REBASE ref # 38132
Complete sequence: 5,197,582 bp
GenBank #: CP142439
REBASE acronym: EcoCase3
Org_num: 74032
All begin VUP53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 445 | sce7726 family protein | |||
| 450 | R | EcoCase6ORF480P (100% identity) | CAAYNNNNNCTGC | EcoCase3ORF455P |
| 455 | M | M.SflN116ORF3940P (100% identity) | CAAYNNNNNCTGC | M.EcoCase3ORF455P |
| 460 | S | S.SflN116ORF3940P (99% identity) | CAAYNNNNNCTGC | S.EcoCase3ORF455P |
| 465 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | cell division protein DamX | |||
| 2140 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCase3DamP |
| 2145 | ribulose-phosphate 3-epimerase | |||
| 6820 | 344 aa hypothetical protein | |||
| 6825 | R | EcoGTEN97ORFFP (95% identity) | EcoCase3ORF6830P | |
| 6830 | M | M.EcoT040ORF14860P (97% identity) | M.EcoCase3ORF6830P | |
| 6835 | integrase | |||
| 10560 | phosphohydrolase | |||
| 10565 | M | M.Ecos135DcmP (100% identity) | CCWGG | M.EcoCase3DcmP |
| 10570 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoCase3DcmP |
| 10575 | drug/metabolite exporter YedA | |||
| 11150 | TrmB family transcriptional regulator | |||
| 11155 | M | M.SflJ17BORF23540P (100% identity) | A | M.EcoCase3ORF11155P |
| 11175 | 50 aa hypothetical protein | |||
| 21830 | HNH endonuclease | |||
| 21835 | R | Sso8ORF19860P (100% identity) | EcoCase3ORF21835P | |
| 21840 | 100 aa hypothetical protein | |||
| 22190 | 137 aa hypothetical protein | |||
| ??? | M | M.Sen5773ORF4471P (99% identity) | M.EcoCase3ORF22200P | |
| 22205 | ATP-binding protein | |||
| 22210 | response regulator receiver domain | |||
| 22215 | R | Ecou021ORF20225P (100% identity) | EcoCase3ORF22215P | |
| 22220 | 97 aa hypothetical protein | |||