Escherichia coli ExPEC_A58 |
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Putative Escherichia coli ExPEC_A58 RM systems
Ref: Li,X. et al. unpublished
REBASE ref # 38134
| Sequence length: | GenBank #: | |
| Chromosome: | 4,808,468 bp | CP142531 |
| plasmid pA58_p1: | 112,167 bp | CP142533 |
| plasmid pA58_p2: | 101,686 bp | CP142534 |
REBASE acronym: EcoA58
Org_num: 74053
All begin SNA36_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12785 | integrase core domain-containing protein | |||
| 12790 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoA58ORF12790P |
| 12795 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoA58ORF12790P |
| 12800 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoA58ORF12790P |
| 12805 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1570 | TrmB family transcriptional regulator | |||
| 1575 | M | M.EcosE1ORFAP (100% identity) | M.EcoA58ORF1575P | |
| 1580 | 63 aa hypothetical protein | |||
| 9490 | drug/metabolite exporter YedA | |||
| 9495 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.EcoA58DcmP |
| 9500 | M | M.EcoteDDcmP (100% identity) | CCWGG | M.EcoA58DcmP |
| 9505 | phosphohydrolase | |||
| 16620 | ribulose-phosphate 3-epimerase | |||
| 16625 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA58DamP |
| 16630 | cell division protein DamX | |||
| plasmid pA58_p1 | ||||
| 24500 | 73 aa hypothetical protein | |||
| 24505 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoA58ORF24505P |
| 24510 | 101 aa hypothetical protein | |||
| plasmid pA58_p2 | ||||
| 25750 | 73 aa hypothetical protein | |||
| 25755 | M | M.StyR64ORFAP (100% identity) | M.EcoA58ORF25755P | |
| 25760 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5280 | recombinase family protein | |||
| 5285 | R | EcoteDMcrBP (100% identity) | EcoA58McrBP | |
| 5290 | R | EmaE2C08McrCP (100% identity) | EcoA58McrCP | |
| 5295 | isocitrate/isopropylmalate family dehydrogenase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3525 | TraR/DksA family transcriptional regulator | |||
| 3530 | M | M.Sen663ORF16605P (100% identity) | GATC | M.EcoA58ORF3530P |
| 3535 | replication endonuclease | |||