Bacteroides fragilis 638R |
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Putative Bacteroides fragilis 638R RM systems
Ref: Patrick,S. et al. Microbiology (Reading, Engl.) 156 (PT 11), 3255-3269 (2010)
REBASE ref # 12322
Complete sequence: 5,373,121 bp
GenBank #: FQ312004
REBASE acronym: Bfr638
Org_num: 4006
All begin BF638R_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1141 | DNA-binding protein | |||
| 1142 | R | BthC24ORF4666P (100% identity) | Bfr638ORF1144P | |
| 1143 | 231 aa conserved hypothetical protein | |||
| 1144 | M | M.BthC24ORF4666P (100% identity) | M.Bfr638ORF1144P | |
| 1145 | 459 aa conserved hypothetical protein | |||
| 1146 | S | S.Bfr638ORF1144P (100% identity) | S1.Bfr638ORF1144P | |
| ??? | S | S2.BfrBFG14ORF8935P (100% identity) | S2.Bfr638ORF1144P | |
| 1148 | S | S3.BthC24ORF4666P (100% identity) | S3.Bfr638ORF1144P | |
| 1149 | S | S1.Bfr642ORF9985P (86% identity) | S4.Bfr638ORF1144P | |
| 1150 | phage integrase/recombinase | |||
| 1162 | 817 aa conserved hypothetical protein | |||
| 1163 | C | C.Bfr9ORF20000P (100% identity) | C.Bfr638ORF1165P | |
| 1164 | R | Bfr70ORF9170P (100% identity) | Bfr638ORF1165P | |
| 1165 | M | M.Bfr9ORF20000P (100% identity) | M.Bfr638ORF1165P | |
| 1166 | 333 aa conserved hypothetical protein | |||
| 1167 | 100 aa hypothetical protein | |||
| 1168 | S | S1.Pdi574ORF8250P (62% identity) | S1.Bfr638ORF1165P | |
| 1169 | S | S2.Bfr9ORF20000P (99% identity) | S2.Bfr638ORF1165P | |
| 1170 | DNA-damage-inducible protein d | |||
| 4081 | 164 aa hypothetical protein | |||
| ??? | M | M.BfrGUT04ORFCP (100% identity) | M.Bfr638ORF4083P | |
| 4085 | S | S1.BfrGUT04ORFCP (99% identity) | S1.Bfr638ORF4083P | |
| 4086 | S | S2.BfrGUT04ORFCP (93% identity) | S2.Bfr638ORF4083P | |
| 4087 | bacteriophage integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1809 | transposase | |||
| 1811 | RM | PmeBin96ORFBP (97% identity) | Bfr638ORF1811P | |
| 1813 | 250 aa conserved hypothetical protein | |||
| 1809 | transposase | |||
| ??? | RM | PmeBin96ORFBP (100% identity) | Bfr638ORF367P | |
| 1813 | 250 aa conserved hypothetical protein | |||
| 2018 | 91 aa hypothetical transmembrane protein | |||
| 2019 | M | M.BfrBFG14ORF12575P (100% identity) | M.Bfr638ORF2019P | |
| 2020 | 821 aa conserved hypothetical protein | |||
| 3661 | 139 aa conserved hypothetical protein | |||
| 3662 | M | M.BfrYORF2470P (100% identity) | M.Bfr638ORF3662P | |
| 3663 | 116 aa conserved hypothetical protein | |||
| 4081 | 164 aa hypothetical protein | |||
| ??? | M | M.BfrGUT04ORFCP (100% identity) | M.Bfr638ORF4803P | |
| 4085 | 116 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1129 | ribosomal large subunit pseudouridine | |||
| 1130 | R | BfrBOB25ORF4955P (99% identity) | Bfr638ORF1131P | |
| 1131 | M | M.BfrFAAORFBP (99% identity) | M.Bfr638ORF1131P | |
| 1132 | glycosyl hydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1218 | TonB-dependent receptor | |||
| 1219 | R | Bxy111McrBP (61% identity) | Bfr638McrBP | |
| 1220 | 106 aa conserved hypothetical protein | |||