Paracoccus denitrificans HAMBI_2443 |
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Putative Paracoccus denitrificans HAMBI_2443 RM systems
Ref: Hogle,S.L. unpublished
REBASE ref # 37977
| Sequence length: | GenBank #: | |
| Chromosome: | 2,853,118 bp | CP141052 |
| plasmid unnamed1: | 1,730,091 bp | CP141053 |
REBASE acronym: Pde3
Org_num: 73670
All begin U0005_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 155 | HNH endonuclease signature motif containing | |||
| 160 | M | M2.PdeDYTN1ORF11245P (100% identity) | M.Pde3ORF160P | |
| 165 | 74 aa hypothetical protein | |||
| 190 | terminase large subunit | |||
| 195 | V | V.PdeDYTN1ORF11245P (100% identity) | V.Pde3ORF200P | |
| 200 | M | M1.PdeDYTN1ORF11245P (100% identity) | M.Pde3ORF200P | |
| ??? | R | PdeDYTN1ORF11245P (100% identity) | Pde3ORF200P | |
| 210 | IS5-like element IS1248A family transposase | |||
| 3760 | DUF2326 domain-containing protein | |||
| 3765 | RM | PdeDYTN1ORF8440P (100% identity) | Pde3ORF3765P | |
| 3770 | DEAD/DEAH box helicase | |||
| 5760 | DNA polymerase III subunit beta | |||
| 5765 | M | M.PdeDYTN1ORF5670P (100% identity) | M.Pde3ORF5765P | |
| 5770 | 143 aa hypothetical protein | |||
| 8990 | DNA polymerase III subunit beta | |||
| 8995 | M | M.PdeDYTN1ORF2445P (100% identity) | M.Pde3ORF8995P | |
| 9000 | 139 aa hypothetical protein | |||
| 9395 | type II toxin-antitoxin system HigB family | |||
| 9400 | M | M2.PdeDYTN1ORF2030P (100% identity) | M1.Pde3ORF9400P | |
| 9405 | M | M1.PdeDYTN1ORF2030P (100% identity) | M2.Pde3ORF9400P | |
| 9410 | 91 aa hypothetical protein | |||
| 10045 | S26 family signal peptidase | |||
| ??? | M | M.PdeDYTN1ORF1390P (100% identity) | M.Pde3ORF10050P | |
| 10055 | IS110 family transposase | |||
| 10125 | 96 aa hypothetical protein | |||
| 10130 | M | M.Pde19367ORF8505P (100% identity) | M.Pde3ORF10130P | |
| 10135 | 138 aa hypothetical protein | |||
| 14470 | ribonuclease HII | |||
| 5 | M | M.PdeR1ORF2250P (100% identity) | GANTC | M.Pde3ORF5P |
| 10 | GSCFA domain-containing protein | |||
| plasmid unnamed1 | ||||
| 14480 | DUF2840 domain-containing protein | |||
| 14485 | M | M.PdeDYTN1ORF17200P (100% identity) | YGGCCR | M.Pde3ORF14485P |
| 14490 | S26 family signal peptidase | |||
| 22055 | 138 aa hypothetical protein | |||
| 22060 | M | M.Pde19367ORF16110P (100% identity) | M.Pde3ORF22060P | |
| 22065 | 100 aa hypothetical protein | |||
| 22140 | DUF2840 domain-containing protein | |||
| 22145 | M | M.PdeDYTN1ORF16260P (100% identity) | YGGCCR | M.Pde3ORF22145P |
| 22150 | S26 family signal peptidase | |||
| 22995 | 138 aa hypothetical protein | |||
| 23000 | M | M.PdeDYTN1ORF17125P (100% identity) | M.Pde3ORF23000P | |
| 23005 | 96 aa hypothetical protein | |||