Mycoplasmopsis canis 58334 |
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Putative Mycoplasmopsis canis 58334 RM systems
Ref: Framst,I. et al. unpublished
REBASE ref # 38004
Complete sequence: 1,007,054 bp
GenBank #: CP141037
REBASE acronym: Mca58334
Org_num: 73638
All begin RRG48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4010 | site-specific integrase | |||
| 4015 | R | Mcy85384ORF610P (100% identity) | Mca58334ORF4025P | |
| 4020 | S | S1.Mcy85384ORF610P (100% identity) | S1.Mca58334ORF4025P | |
| 4025 | M | M.Mcy94662ORF3265P (100% identity) | M.Mca58334ORF4025P | |
| 4030 | S | S2.Mcy85384ORF610P (100% identity) | S2.Mca58334ORF4025P | |
| 4035 | S | S3.Mcy85384ORF610P (100% identity) | S3.Mca58334ORF4025P | |
| 4040 | S | S4.Mcy94662ORF3265P (3% identity) | S4.Mca58334ORF4025P | |
| 5915 | 63 aa hypothetical protein | |||
| 5920 | S | S.Mcy87299ORF2145P (100% identity) | S.Mca58334ORF5920P | |
| 5925 | helix-turn-helix domain-containing protein | |||
| 3060 | nucleotidyltransferase domain-containing | |||
| 3065 | S | S2.McaLVORF600P (41% identity) | S3.Mca58334ORF3085P | |
| 3070 | site-specific tyrosine recombinase/integron | |||
| 3075 | S | S2.Mov2AORF3665P (51% identity) | S2.Mca58334ORF3085P | |
| 3080 | S | S1.McaLVORF600P (42% identity) | S1.Mca58334ORF3085P | |
| 3085 | M | M.McaLVORF600P (99% identity) | M.Mca58334ORF3085P | |
| 3090 | R | McaUF33ORF2316P (98% identity) | Mca58334ORF3085P | |
| 3095 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3640 | hypoxanthine phosphoribosyltransferase | |||
| 3645 | M | M.Mcy85384ORF205P (100% identity) | M.Mca58334ORF3645P | |
| 3650 | R | Mcy85384ORF205P (100% identity) | Mca58334ORF3645P | |
| 3655 | amino acid permease | |||
| 4950 | DnaB-like helicase C-terminal domain-containing | |||
| 4955 | M | M.Mcy97732ORF1380P (100% identity) | M.Mca58334ORF4955P | |
| 4960 | DUF262 domain-containing protein | |||
| 5425 | 302 aa hypothetical protein | |||
| 5430 | M | M1.Mcy85384ORF2330P (100% identity) | M1.Mca58334ORF5430P | |
| 5435 | M | M2.Mcy94662ORF2510P (100% identity) | M2.Mca58334ORF5430P | |
| 5440 | HNH endonuclease | |||
| 2795 | 416 aa hypothetical protein | |||
| 2800 | M | M.McaUF33ORF2061P (99% identity) | M.Mca58334ORF2800P | |
| 2805 | DUF262 domain-containing protein | |||
| 1380 | DNA topoisomerase IV subunit A | |||
| 6830 | RM | Mcy85384ORF3925P (100% identity) | Mca58334ORF6830P | |
| 6835 | energy-coupling factor transporter transmembrane | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2665 | KilA-N domain-containing protein | |||
| 2670 | M | M.McaPG14ORF1931P (98% identity) | M.Mca58334ORF2670AP | |
| 2675 | M | M.McaPG14ORF990P (77% identity) | M.Mca58334ORF2670BP | |
| 2680 | R | McaUF31ORF1891P (98% identity) | Mca58334ORF2670P | |
| 2685 | GTPase Era | |||
| 6770 | FAD-dependent oxidoreductase | |||
| 6775 | R | Mcy85384ORF3850P (100% identity) | Mca58334ORF6780P | |
| 6780 | M | M.Mcy85384ORF3850P (100% identity) | M.Mca58334ORF6780P | |
| 2665 | KilA-N domain-containing protein | |||
| 6800 | IS30 family transposase | |||
| 2680 | R | Mcy85384ORF3880P (100% identity) | Mca58334ORF2675P | |
| ??? | M | M.Mcy101aORF15P (97% identity) | M.Mca58334ORF2675P | |
| 6805 | 70 aa hypothetical protein | |||
| 6815 | IS30 family transposase | |||
| 6820 | R | Mcy85384ORF3910P (100% identity) | Mca58334ORF6825P | |
| 6825 | M | M.Mcy85384ORF3910P (100% identity) | M.Mca58334ORF6825P | |
| 1375 | lysine--tRNA ligase | |||