Mycoplasmopsis felis 53109 |
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Putative Mycoplasmopsis felis 53109 RM systems
Ref: Framst,I. et al. unpublished
REBASE ref # 38004
Complete sequence: 955,105 bp
GenBank #: CP141028
REBASE acronym: Mfe53109
Org_num: 73656
All begin RRG40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3880 | 93 aa hypothetical protein | |||
| 3885 | S | S.Mfe99014ORF45P (100% identity) | S.Mfe53109ORF3885P | |
| 3890 | IS256 family transposase | |||
| 2080 | 1191 aa hypothetical protein | |||
| 2075 | S | S.Mfe11534ORF2635P (67% identity) | S.Mfe53109ORF2075P | |
| 2320 | DUF31 family protein | |||
| 1475 | ribosome biogenesis GTPase Der | |||
| 1480 | S | S.Mfe11534ORF3985P (100% identity) | S.Mfe53109ORF1480P | |
| 1485 | signal recognition particle protein | |||
| 1575 | IS1634 family transposase | |||
| 1580 | S | S.Mfe11534ORF4080P (100% identity) | S.Mfe53109ORF1580P | |
| 1585 | 67 aa hypothetical protein | |||
| 1945 | MurR/RpiR family transcriptional regulator | |||
| 1975 | M | M.Mfe11534ORF330P (100% identity) | M.Mfe53109ORF1975P | |
| 1980 | R | Mfe11534ORF330P (100% identity) | Mfe53109ORF1975P | |
| 1985 | 246 aa hypothetical protein | |||
| 2310 | 1470 aa hypothetical protein | |||
| 2315 | S | S.Mfe11534ORF4490P (100% identity) | S.Mfe53109ORF2315P | |
| 2320 | DUF31 family protein | |||
| 315 | cation-translocating P-type ATPase | |||
| 320 | S | S.Mfe27649ORF2495P (95% identity) | S.Mfe53109ORF320P | |
| 325 | 50S ribosomal protein L33 | |||
| 455 | DUF2179 domain-containing protein | |||
| 465 | S | S.Mfe99014ORF2220P (100% identity) | S.Mfe53109ORF465P | |
| 470 | 2,3-bisphosphoglycerate-independent | |||
| 920 | energy-coupling factor transporter transmembrane | |||
| 925 | S | S.Mfe71855ORF4000P (96% identity) | S.Mfe53109ORF925P | |
| 930 | 135 aa hypothetical protein | |||
| 4340 | 518 aa hypothetical protein | |||
| 4345 | S | S.Mfe64570ORF3285P (94% identity) | S.Mfe53109ORF4345P | |
| 2070 | HU family DNA-binding protein | |||
| 1985 | 246 aa hypothetical protein | |||
| 1980 | R | Mfe99014ORF2950P (100% identity) | Mfe53109ORF4365P | |
| 4365 | M | M.Mfe99014ORF2950CP (100% identity) | M.Mfe53109ORF4365CP | |
| 4370 | transposase | |||
| 4375 | M | M.Mfe99014ORF2950BP (100% identity) | M.Mfe53109ORF4365BP | |
| 4380 | M | M.Mfe99014ORF2950AP (100% identity) | M.Mfe53109ORF4365AP | |
| 1945 | MurR/RpiR family transcriptional regulator | |||
| 3320 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 3325 | S | S.Mfe11534ORF1655P (100% identity) | S.Mfe53109ORF3325P | |
| 3330 | SsrA-binding protein | |||
| 4415 | ATP-binding protein | |||
| 4420 | S | S.Mfe99014ORF3355P (100% identity) | S.Mfe53109ORF4420P | |
| 1485 | signal recognition particle protein | |||
| 1570 | lysine--tRNA ligase | |||
| 4450 | S | S.Mfe99014ORF3465P (100% identity) | S.Mfe53109ORF4450P | |
| 4455 | IS256 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3910 | N-6 DNA methylase | |||
| 3915 | M | M.Mfe99014ORF180P (97% identity) | M.Mfe53109ORF3915P | |
| 3920 | S | S.Mfe99014ORF180P (100% identity) | S.Mfe53109ORF3915P | |
| 2155 | Cof-type HAD-IIB family hydrolase | |||
| 1390 | 50S ribosomal protein L11 | |||
| 1395 | R | Mfe11534ORF4355P (100% identity) | Mfe53109ORF1400P | |
| 1400 | M | M.Mfe11534ORF4355BP (100% identity) | M.Mfe53109ORF1400BP | |
| 1405 | 51 aa hypothetical protein | |||
| 1410 | IS1634 family transposase | |||
| 1415 | M | M.Mfe11534ORF4355AP (100% identity) | M.Mfe53109ORF1400AP | |
| 1420 | elongation factor G | |||
| 3580 | 87 aa hypothetical protein | |||
| 3585 | M | M.Mfe99014ORF1525P (100% identity) | M.Mfe53109ORF3580BP | |
| 4095 | HNH endonuclease | |||
| 4150 | 57 aa hypothetical protein | |||
| 3845 | M | M.MfeCOORF1750P (48% identity) | M.Mfe53109ORF3845P | |
| 3850 | pseudouridine synthase | |||
| 2155 | Cof-type HAD-IIB family hydrolase | |||
| 2165 | S | S.Mfe11534ORF590P (100% identity) | S.Mfe53109ORF2170P | |
| 2170 | RM | Mfe11534ORF590P (100% identity) | Mfe53109ORF2170P | |
| 2175 | NAD-dependent DNA ligase LigA | |||
| 4220 | IS256 family transposase | |||
| 785 | M | M.Mfe99014ORF2560CP (100% identity) | M.Mfe53109ORF785AP | |
| 4225 | 48 aa hypothetical protein | |||
| 4230 | M | M.Mfe99014ORF2560BP (100% identity) | M.Mfe53109ORF785BP | |
| 4235 | M | M.Mfe99014ORF2560AP (100% identity) | M.Mfe53109ORF785CP | |
| 4240 | 84 aa hypothetical protein | |||
| 1900 | M13 family metallopeptidase | |||
| 1895 | M | M1.Mfe99014ORF3045P (100% identity) | M.Mfe53109ORF1895P | |
| 4385 | R | R1.Mfe99014ORF3045P (100% identity) | Mfe53109ORF1895P | |
| 1880 | ABC transporter ATP-binding protein/permease | |||
| 1865 | 50 aa hypothetical protein | |||
| 1860 | R | R2.Mfe99014ORF3045P (100% identity) | Mfe53109ORF1855P | |
| 1855 | M | M2.Mfe99014ORF3045P (100% identity) | M.Mfe53109ORF1855P | |
| 1850 | DUF3137 domain-containing protein | |||
| 4445 | 252 aa hypothetical protein | |||
| 1525 | R | Mfe99751ORF1230P (99% identity) | Mfe53109ORF1530P | |
| 1530 | M | M.Mfe99751ORF1230P (99% identity) | M.Mfe53109ORF1530P | |
| 1540 | NUDIX domain-containing protein | |||
| 1015 | DNA polymerase III subunit gamma/tau | |||
| 4515 | R | Mfe99014ORF3665BP (100% identity) | Mfe53109ORF1025BP | |
| 4520 | R | Mfe99014ORF3665AP (100% identity) | Mfe53109ORF1025AP | |
| 1025 | M | M.Mfe27649ORF1425P (99% identity) | M.Mfe53109ORF1025P | |
| 1035 | DnaJ C-terminal domain-containing protein | |||
| 1070 | elongation factor Tu | |||
| 1080 | M | M.Mfe99014ORF3720P (100% identity) | M.Mfe53109ORF1080P | |
| ??? | R | Mfe21976ORF1150P (99% identity) | Mfe53109ORF1080P | |
| 1095 | Sua5/YciO/YrdC/YwlC family protein | |||
| 1390 | 50S ribosomal protein L11 | |||
| 1395 | R | Mfe99751ORF1075P (100% identity) | Mfe53109ORF4590P | |
| 4590 | M | M.Mfe99751ORF1075P (100% identity) | M.Mfe53109ORF4590P | |
| 4595 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2680 | 178 aa hypothetical protein | |||
| 2685 | R | Mfe64570ORF2255P (98% identity) | Mfe53109ORF2690P | |
| ??? | M | M.Mfe35610ORF1000P (95% identity) | M.Mfe53109ORF2690P | |
| 2700 | HAD-IIB family hydrolase | |||
| 3030 | 6-phosphofructokinase | |||
| 3955 | M | M.Mfe99751ORF245P (99% identity) | M.Mfe53109ORF3955P | |
| 3960 | R | Mfe99751ORF245P (99% identity) | Mfe53109ORF3955P | |
| 3965 | 56 aa hypothetical protein | |||
| 3455 | 40 aa hypothetical protein | |||
| 3460 | R | Mfe99014ORF1385P (100% identity) | Mfe53109ORF4045P | |
| 4045 | M | M1.Mfe99014ORF1385P (100% identity) | M1.Mfe53109ORF4045P | |
| 4050 | 504 aa hypothetical protein | |||
| ??? | M | M2.Mfe99014ORF1385P (100% identity) | M2.Mfe53109ORF4045P | |
| 3470 | 504 aa hypothetical protein | |||
| ??? | M | M3.Mfe99014ORF1385P (100% identity) | M3.Mfe53109ORF4045P | |
| 4060 | 123 aa hypothetical protein | |||
| 3695 | 97 aa hypothetical protein | |||
| 3700 | R | Mfe99751ORF2290P (95% identity) | Mfe53109ORF3705P | |
| 3705 | M | M.Mfe99014ORF1645BP (100% identity) | M.Mfe53109ORF3705BP | |
| 3710 | M | M.Mfe99014ORF1645AP (100% identity) | M.Mfe53109ORF3705AP | |
| 3715 | 23S rRNA | |||
| 3455 | 40 aa hypothetical protein | |||
| 3460 | R | Mfe11534ORF1825P (100% identity) | Mfe53109ORF3465P | |
| 3465 | M | M2.Mfe11534ORF1825P (100% identity) | M1.Mfe53109ORF3465P | |
| 3470 | 69 aa hypothetical protein | |||
| 3475 | 100 aa hypothetical protein | |||
| ??? | M | M1.Mfe11534ORF1825P (100% identity) | M2.Mfe53109ORF3465P | |
| 3490 | 71 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3340 | IS3 family transposase | |||
| 3345 | R | Mfe329GmrSDP (69% identity) | Mfe53109GmrSD2P | |
| 3350 | DNA topoisomerase subunit B | |||
| 3340 | IS3 family transposase | |||
| 3345 | R | Mfe11534GmrSDP (100% identity) | Mfe53109GmrSDP | |
| 3350 | DNA topoisomerase subunit B | |||