Pseudomonas species RTB3 |
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Putative Pseudomonas species RTB3 RM systems
Ref: Jaarsma,A. unpublished
REBASE ref # 37954
Complete sequence: 5,697,935 bp
GenBank #: CP140254
REBASE acronym: PspRTB3
Org_num: 73688
All begin RHM66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9115 | restriction endonuclease | |||
| 9120 | S | S.PspMH93ORF17395P (100% identity) | S.PspRTB3ORF9125P | |
| 9125 | M | M.PspMH93ORF17395P (43% identity) | M.PspRTB3ORF9125BP | |
| 9130 | M | M.PspMH93ORF17395P (51% identity) | M.PspRTB3ORF9125AP | |
| 9135 | R | PspMH93ORF17395P (100% identity) | PspRTB3ORF9125P | |
| 9140 | tyrosine-type recombinase/integrase | |||
| 14460 | tyrosine-type recombinase/integrase | |||
| 14465 | M | M.PspMH93ORF12180AP (100% identity) | M.PspRTB3ORF14465AP | |
| 14470 | M | M.PspMH93ORF12180BP (100% identity) | M.PspRTB3ORF14465BP | |
| 14475 | S | S1.PspMH93ORF12180P (32% identity) | S1.PspRTB3ORF14465P | |
| 14480 | S | S1.PspMH93ORF12180P (59% identity) | S2.PspRTB3ORF14465P | |
| 14485 | anticodon nuclease | |||
| 14490 | S | S2.PspMH93ORF12180P (100% identity) | S3.PspRTB3ORF14465P | |
| 14495 | R | PspMH93ORF12180P (19% identity) | PspRTB3ORF14465AP | |
| 14500 | R | PspMH93ORF12180P (50% identity) | PspRTB3ORF14465BP | |
| 14505 | R | PspMH93ORF12180P (29% identity) | PspRTB3ORF14465CP | |
| 14510 | 91 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17385 | 144 aa hypothetical protein | |||
| 17390 | M | M.PspMH93ORF9315P (100% identity) | M.PspRTB3ORF17390P | |
| 17395 | 175 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9110 | 132 aa hypothetical protein | |||
| 9115 | R | PspMH93MrrP (100% identity) | PspRTB3MrrP | |
| 9120 | restriction endonuclease subunit S | |||
| 16710 | HAD-IB family hydrolase | |||
| 16715 | R | PspMH93ORF10000P (100% identity) | PspRTB3ORF16715P | |
| 16720 | ribonucleotide-diphosphate reductase subunit | |||