Escherichia coli GU2018_CL13 |
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Putative Escherichia coli GU2018_CL13 RM systems
Ref: Sato,Y. et al. unpublished
REBASE ref # 37947
Complete sequence: 5,069,646 bp
GenBank #: AP029000
REBASE acronym: EcoL13
Org_num: 73389
All begin GU2018CL13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39030 | adenine/cytosine-specific restriction | |||
| 39040 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoL13ORF39050P |
| 39050 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.EcoL13ORF39050P |
| 39060 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoL13ORF39050P |
| 39070 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3400 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.EcoL13DamP |
| 3420 | ribulose-phosphate 3-epimerase | |||
| 4510 | multidrug efflux transporter transcriptional | |||
| 4520 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoL13ORF4520P |
| 4530 | DNA-binding transcriptional regulator Fis | |||
| 11000 | PerC family transcriptional regulator | |||
| 11010 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoL13ORF11010P |
| 11020 | LexA family transcriptional regulator | |||
| 18750 | phosphohydrolase | |||
| 18760 | M | M.EcoXMDcmP (100% identity) | CCWGG | M.EcoL13DcmP |
| 18770 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoL13DcmP |
| 18780 | drug/metabolite exporter YedA | |||
| 25210 | 75 aa hypothetical protein | |||
| 25220 | M | M.SboBSORF1444P (100% identity) | A | M.EcoL13ORF25220P |
| 25230 | 65 aa hypothetical protein | |||
| 39480 | N-acetylneuraminate epimerase | |||
| 39490 | R | Ecoi127aORF4076P (100% identity) | EcoL13ORF39490P | |
| 39500 | 59 aa hypothetical protein | |||
| 40060 | 118 aa hypothetical protein | |||
| 40070 | M | M.EcosS3ORF15775P (100% identity) | M.EcoL13ORF40070P | |
| 40080 | R | EcosS3ORF15775P (100% identity) | EcoL13ORF40070P | |
| 40090 | 555 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11410 | 42 aa hypothetical protein | |||
| ??? | R | EspFAAGmrSDP (100% identity) | EcoL13GmrSDP | |
| 11440 | 45 aa hypothetical protein | |||
| 39020 | GTPase | |||
| 39030 | R | EcosS1MrrP (100% identity) | EcoL13MrrP | |
| 39040 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26760 | DUF2591 family protein | |||
| 26770 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoL13ORF26770P |
| 26780 | recombination protein NinB | |||