Vibrio cholerae VIC11-A |
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Putative Vibrio cholerae VIC11-A RM systems
Ref: Fayad,A.A. et al. unpublished
REBASE ref # 37934
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,049,826 bp | CP134058 |
| chromosome 2: | 1,048,335 bp | CP134057 |
| plasmid pVIC11-A: | 139,375 bp | CP134059 |
REBASE acronym: Vch1A
Org_num: 73364
All begin RI644_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 15725 | anti-phage ZorAB system protein ZorA | |||
| 15730 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch1AORF15750P |
| 15735 | DUF262 domain-containing protein | |||
| 15740 | DUF262 domain-containing protein | |||
| 15745 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch1AORF15750P |
| 15750 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch1AORF15750P |
| 15755 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5980 | ribulose-phosphate 3-epimerase | |||
| 5985 | M | M.VspNIH41DamP (99% identity) | GATC | M.Vch1ADamP |
| 5990 | AAA family ATPase | |||
| 10125 | BREX system P-loop protein BrxC | |||
| 10130 | RM | VchPC1ORF10795P (100% identity) | RTAAAYG | Vch1AORF10130P |
| 10135 | PglZ domain-containing protein | |||
| chromosome 2 | ||||
| 1330 | DUF3696 domain-containing protein | |||
| 1335 | R | VchsMO10ORF14720P (100% identity) | RCCGGY | Vch1AORF1340P |
| 1340 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch1AORF1340P |
| 1345 | GMP reductase | |||
| plasmid pVIC11-A | ||||
| 19500 | 143 aa hypothetical protein | |||
| 19505 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Vch1AORF19505P |
| 19510 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11150 | nuclease-related domain-containing protein | |||
| 11155 | R | VchsMO10ORF9915P (100% identity) | Vch1AORF11155P | |
| 11160 | class I SAM-dependent methyltransferase | |||