Escherichia coli RM6067 |
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Putative Escherichia coli RM6067 RM systems
Ref: Peroutka-Bigus,N. et al. unpublished
REBASE ref # 37890
Complete sequence: 5,528,145 bp
GenBank #: CP111098
REBASE acronym: Eco6067
Org_num: 73106
All begin ORM93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14875 | DUF262 domain-containing protein | |||
| 14880 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco6067ORF14885P |
| 14885 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco6067ORF14885P |
| 14890 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco6067ORF14885P |
| 14895 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 735 | recombination protein NinB | |||
| 740 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco6067ORF740P |
| 745 | NinE family protein | |||
| 1560 | phosphohydrolase | |||
| 1565 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco6067DcmP |
| 1570 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco6067DcmP |
| 1575 | drug/metabolite exporter YedA | |||
| 5785 | 45 aa hypothetical protein | |||
| 5795 | M | M.EcoTWORF1742P (100% identity) | M.Eco6067ORF5795P | |
| 5800 | TrmB family transcriptional regulator | |||
| 6200 | DUF1737 domain-containing protein | |||
| 6215 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco6067ORF6215P | |
| 6220 | TrmB family transcriptional regulator | |||
| 15110 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco6067ORF15110P |
| 15115 | DEAD/DEAH box helicase | |||
| 15145 | N-acetylneuraminic acid mutarotase | |||
| 15150 | R | EcosPA8ORF17350P (100% identity) | Eco6067ORF15150P | |
| 15155 | transposase | |||
| 16380 | Eae protein | |||
| 16385 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco6067ORF16385P | |
| 16390 | 65 aa hypothetical protein | |||
| 20350 | cell division protein DamX | |||
| 20355 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6067DamP |
| 20360 | ribulose-phosphate 3-epimerase | |||
| 20870 | DUF2556 family protein | |||
| 20875 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco6067ORF20875P |
| 20880 | DNA-binding transcriptional regulator Fis | |||
| 25555 | DUF1382 family protein | |||
| 25560 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco6067ORF25560P |
| 25565 | 55 aa hypothetical protein | |||
| 25740 | NUMOD4 domain-containing protein | |||
| 25745 | M | M.EcoTWORF3263P (100% identity) | GATC | M.Eco6067ORF25745P |
| 25750 | NinE family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14895 | endoribonuclease SymE | |||
| 14900 | R | EcosPA8GmrSDP (55% identity) | Eco6067GmrDP | |
| 14905 | R | Ecos1613GmrSP (100% identity) | Eco6067GmrSP | |
| 14910 | cytoplasmic protein | |||